fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52020.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009253 not found in 261aa AT5G52020.1 1st_1st 0.348404255 Ib
Pt024198 not found in 282aa AT5G52020.1 1st_1st 0.404255319 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G52020.1     MSN-----NNNSPTTVNQE-----TTTSREV-----SITLPTDQSPQTSPGSSSS-----
Os009253_Os02t0 MADLTEHPSPTAPPQVQTAGLPAAASPG------PASPHSPSEQGDKTAPGAATA-----
pt024198_POPTR_ MAN-----TNSNVPQADQSPPPQPSNPSIQVPDPPSSILLPILQDDQYAPHSTSSNKSPR
                *::     . .  . .:       :...        *   *  *. : :* ::::     

AT5G52020.1     --PSP--------------------------------------RPSGGSPARRTATGLSG
Os009253_Os02t0 ---------------------------------------STMTTASSGEPSPRS----SG
pt024198_POPTR_ LIPSPAGSLGQPLTVRQDEYSPRFGFPGQPVSGRQDDQSPRSTRSSGGSSTQPT----SG
                                                            .*.*..:  :    **

AT5G52020.1     KHSIFRGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFP
Os009253_Os02t0 KHAFYRGIRCRSGKWVSEIREPRKARRIWLGTYPTAEMAAAAYDVAARALRGADAVLNFP
pt024198_POPTR_ RHPSYKGIRLRSGKWVSEIREPRKTTRVWLGTYPTPEMAAAAYDAAALALKGPDTPLNFP
                :*. ::*** *.************: *:******..********.** **:*.*: ****

AT5G52020.1     GLALTYVAPVSNSAADIRAAASRAAEMK----QPDQGGDEKVLEPVQPGKEEELEEVSCN
Os009253_Os02t0 GATASRPVPASASPADIRAAAAAAAAAAAHLERPHGPTGTAYPATAAAEHHQQQQQQQYG
pt024198_POPTR_ ESILSYPIPASASSSDIRAAAASAASSRS--PRPEAG----------PNPERDRLETEGT
                    :   *.* *.:******: **       :*.            .  ..:  : .  

AT5G52020.1     SCSL-------------------EFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMED
Os009253_Os02t0 SGSP-AADDVSGYPPMEGGIGNDDFMDEEAIFELPQLLRNMAAGMMMSPPR--LSPTTSD
pt024198_POPTR_ SSSTTTADIQSG----------QEFIDEEELLNLPSLLVDMAGGMLVSPPR--INTPSSD
                * *                    :*:*** ::::* ** :** **::****  : .. .*

AT5G52020.1     DSPENHE-GDNLWSYK--
Os009253_Os02t0 VSPEPSEAGESLWSYRDP
pt024198_POPTR_ DSPGNSD-AENLWSYH--
                 **   : .:.****:
BoxShade v3.31 C (beta, 970507) Output
AT5G52020.1     M S N - - - - - N N N S P T T V N Q E - - - - - T T T S R E V - - - - - S I T L P T D Q S P Q T S P G S S S S - - - - -
Os009253_Os02t0    M A D L T E H P S P T A P P Q V Q T A G L P A A A S P G - - - - - - P A S P H S P S E Q G D K T A P G A A T A - - - - -
pt024198_POPTR_    M A N - - - - - T N S N V P Q A D Q S P P P Q P S N P S I Q V P D P P S S I L L P I L Q D D Q Y A P H S T S S N K S P R
 
AT5G52020.1     - - P S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R P S G G S P A R R T A T G L S G
Os009253_Os02t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S T M T T A S S G E P S P R S - - - - S G
pt024198_POPTR_    L I P S P A G S L G Q P L T V R Q D E Y S P R F G F P G Q P V S G R Q D D Q S P R S T R S S G G S S T Q P T - - - - S G
 
AT5G52020.1     K H S I F R G I R L R N G K W V S E I R E P R K T T R I W L G T Y P V P E M A A A A Y D V A A L A L K G P D A V L N F P
Os009253_Os02t0    K H A F Y R G I R C R S G K W V S E I R E P R K A R R I W L G T Y P T A E M A A A A Y D V A A R A L R G A D A V L N F P
pt024198_POPTR_    R H P S Y K G I R L R S G K W V S E I R E P R K T T R V W L G T Y P T P E M A A A A Y D A A A L A L K G P D T P L N F P
 
AT5G52020.1     G L A L T Y V A P V S N S A A D I R A A A S R A A E M K - - - - Q P D Q G G D E K V L E P V Q P G K E E E L E E V S C N
Os009253_Os02t0    G A T A S R P V P A S A S P A D I R A A A A A A A A A A A H L E R P H G P T G T A Y P A T A A A E H H Q Q Q Q Q Q Q Y G
pt024198_POPTR_    E S I L S Y P I P A S A S S S D I R A A A A S A A S S R S - - P R P E A G - - - - - - - - - - P N P E R D R L E T E G T
 
AT5G52020.1     S C S L - - - - - - - - - - - - - - - - - - - E F M D E E A M L N M P T L L T E M A E G M L M S P P R M M I H P T M E D
Os009253_Os02t0    S G S P - A A D D V S G Y P P M E G G I G N D D F M D E E A I F E L P Q L L R N M A A G M M M S P P R - - L S P T T S D
pt024198_POPTR_    S S S T T T A D I Q S G - - - - - - - - - - Q E F I D E E E L L N L P S L L V D M A G G M L V S P P R - - I N T P S S D
 
AT5G52020.1     D S P E N H E - G D N L W S Y K - -
Os009253_Os02t0    V S P E P S E A G E S L W S Y R D P
pt024198_POPTR_    D S P G N S D - A E N L W S Y H - -
 
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