Input
| Putative repression domain
|
|
AT5G52020.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt024198 |
not found in 282aa |
AT5G52020.1 |
1st_1st |
0.404255319 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G52020.1 MSNNNNSPTTVNQE-----TTTSREV-----SITLPTDQSPQTSPGSSSS-------PSP
pt024198_POPTR_ MANTNSNVPQADQSPPPQPSNPSIQVPDPPSSILLPILQDDQYAPHSTSSNKSPRLIPSP
*:*.*.. . .:*. :..* :* ** ** *. * :* *:** ***
AT5G52020.1 --------------------------------------RPSGGSPARRTATGLSGKHSIF
pt024198_POPTR_ AGSLGQPLTVRQDEYSPRFGFPGQPVSGRQDDQSPRSTRSSGGSSTQPT----SGRHPSY
*.****.:: * **:*. :
AT5G52020.1 RGIRLRNGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFPGLALT
pt024198_POPTR_ KGIRLRSGKWVSEIREPRKTTRVWLGTYPTPEMAAAAYDAAALALKGPDTPLNFPESILS
:*****.***************:******.*********.*********: **** *:
AT5G52020.1 YVAPVSNSAADIRAAASRAAEMK--QPDQGGDEKVLEPVQPGKEEELEEVSCNSCSL---
pt024198_POPTR_ YPIPASASSSDIRAAAASAASSRSPRPEAG----------PNPERDRLETEGTSSSTTTA
* *.* *::******: **. : :*: * *. *.: *.. .*.*
AT5G52020.1 ------EFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGDNLWSYK
pt024198_POPTR_ DIQSGQEFIDEEELLNLPSLLVDMAGGMLVSPPR--INTPSSDDSPGNSDAENLWSYH
**:*** :**:*:**.:** ***:**** *:.. .**** * :.:*****:
BoxShade v3.31 C (beta, 970507) Output
AT5G52020.1 |
M |
S |
N |
N |
N |
N |
S |
P |
T |
T |
V |
N |
Q |
E |
- |
- |
- |
- |
- |
T |
T |
T |
S |
R |
E |
V |
- |
- |
- |
- |
- |
S |
I |
T |
L |
P |
T |
D |
Q |
S |
P |
Q |
T |
S |
P |
G |
S |
S |
S |
S |
- |
- |
- |
- |
- |
- |
- |
P |
S |
P |
pt024198_POPTR_ |
M |
A |
N |
T |
N |
S |
N |
V |
P |
Q |
A |
D |
Q |
S |
P |
P |
P |
Q |
P |
S |
N |
P |
S |
I |
Q |
V |
P |
D |
P |
P |
S |
S |
I |
L |
L |
P |
I |
L |
Q |
D |
D |
Q |
Y |
A |
P |
H |
S |
T |
S |
S |
N |
K |
S |
P |
R |
L |
I |
P |
S |
P |
|
AT5G52020.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
P |
S |
G |
G |
S |
P |
A |
R |
R |
T |
A |
T |
G |
L |
S |
G |
K |
H |
S |
I |
F |
pt024198_POPTR_ |
A |
G |
S |
L |
G |
Q |
P |
L |
T |
V |
R |
Q |
D |
E |
Y |
S |
P |
R |
F |
G |
F |
P |
G |
Q |
P |
V |
S |
G |
R |
Q |
D |
D |
Q |
S |
P |
R |
S |
T |
R |
S |
S |
G |
G |
S |
S |
T |
Q |
P |
T |
- |
- |
- |
- |
S |
G |
R |
H |
P |
S |
Y |
|
AT5G52020.1 |
R |
G |
I |
R |
L |
R |
N |
G |
K |
W |
V |
S |
E |
I |
R |
E |
P |
R |
K |
T |
T |
R |
I |
W |
L |
G |
T |
Y |
P |
V |
P |
E |
M |
A |
A |
A |
A |
Y |
D |
V |
A |
A |
L |
A |
L |
K |
G |
P |
D |
A |
V |
L |
N |
F |
P |
G |
L |
A |
L |
T |
pt024198_POPTR_ |
K |
G |
I |
R |
L |
R |
S |
G |
K |
W |
V |
S |
E |
I |
R |
E |
P |
R |
K |
T |
T |
R |
V |
W |
L |
G |
T |
Y |
P |
T |
P |
E |
M |
A |
A |
A |
A |
Y |
D |
A |
A |
A |
L |
A |
L |
K |
G |
P |
D |
T |
P |
L |
N |
F |
P |
E |
S |
I |
L |
S |
|
AT5G52020.1 |
Y |
V |
A |
P |
V |
S |
N |
S |
A |
A |
D |
I |
R |
A |
A |
A |
S |
R |
A |
A |
E |
M |
K |
- |
- |
Q |
P |
D |
Q |
G |
G |
D |
E |
K |
V |
L |
E |
P |
V |
Q |
P |
G |
K |
E |
E |
E |
L |
E |
E |
V |
S |
C |
N |
S |
C |
S |
L |
- |
- |
- |
pt024198_POPTR_ |
Y |
P |
I |
P |
A |
S |
A |
S |
S |
S |
D |
I |
R |
A |
A |
A |
A |
S |
A |
A |
S |
S |
R |
S |
P |
R |
P |
E |
A |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
N |
P |
E |
R |
D |
R |
L |
E |
T |
E |
G |
T |
S |
S |
S |
T |
T |
T |
A |
|
AT5G52020.1 |
- |
- |
- |
- |
- |
- |
E |
F |
M |
D |
E |
E |
A |
M |
L |
N |
M |
P |
T |
L |
L |
T |
E |
M |
A |
E |
G |
M |
L |
M |
S |
P |
P |
R |
M |
M |
I |
H |
P |
T |
M |
E |
D |
D |
S |
P |
E |
N |
H |
E |
G |
D |
N |
L |
W |
S |
Y |
K |
pt024198_POPTR_ |
D |
I |
Q |
S |
G |
Q |
E |
F |
I |
D |
E |
E |
E |
L |
L |
N |
L |
P |
S |
L |
L |
V |
D |
M |
A |
G |
G |
M |
L |
V |
S |
P |
P |
R |
- |
- |
I |
N |
T |
P |
S |
S |
D |
D |
S |
P |
G |
N |
S |
D |
A |
E |
N |
L |
W |
S |
Y |
H |
|
|