fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm054830 not found in 270aa AT3G48920.1 not_not 0.410101010 III
Gm045185 not found in 291aa AT4G25560.1 not_not 0.406060606 III
Gm024849 not found in 262aa AT4G25560.1 not_not 0.402020202 III
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CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G52260.1     -MTKSGERPKQRQRKGLWSPEEDQKLKSFILSRGHACWTTVPILAGLQRNGKSCRLRWIN
gm024849_Glyma0 MESKPLEKAKPKYRKGLWSPEEDNKLRNHIIKHGHGCWSSVPIKAGLQRNGKSCRLRWIN
gm045185_Glyma1 MESQPLEKAKPKYRKGLWSPEEDNKLRNHIIKHGHGCWSSVPIKAGLQRNGKSCRLRWIN
gm054830_Glyma2 MGYQPLEKGKPKHKKGLWSPEEDNKLRNHILKHGHGCWSSVPIKAGLQRNGKSCRLRWIN
                   :. *: * : :*********:**:..*:.:**.**::*** ****************

AT5G52260.1     YLRPGLKRGSFSEEEEETILTLHSSLGNKWSRIAKYLPGRTDNEIKNYWHSYLKKRWLKS
gm024849_Glyma0 YLRPGLKRGVFSKHEKDTIMALHHMLGNKWSQIAQHLPGRTDNEVKNYWHSYLKKKVIKA
gm045185_Glyma1 YLRPGLKRGVFSKHEEDTIMVLHHMLGNKWSQIAQHLPGRTDNEIKNYWHSYLKKKEIKA
gm054830_Glyma2 YLRPGLKRGKFSKQEEETILTLHHMLGNKWSRISQHLPGRTDNEIKNYWHSYLKKRVAKA
                ********* **:.*::**:.**  ******:*:::********:**********:  *:

AT5G52260.1     QPQLKSQISDLTESPSSLLSCGKRNLETETLDHVISFQKFSENPTSSP----------SK
gm024849_Glyma0 K-EMESD-KQIQHAGSS----------SDTVENALSPQKLA---TQDSSYGLLENLDKSI
gm045185_Glyma1 K-EMESD-KEIQHASSS----------SDTMENSLSPQKLA---TQDPSYSLLENLDKSI
gm054830_Glyma2 K-EMESH-NQIKYASSS----------SDTMDSSHSLQNLA---TQCP------------
                : :::*. .::  : **          ::*::   * *:::   *. .            

AT5G52260.1     ESNNNMIMNNSN----------NLPKLFFSEWIS--------SSNP--------HIDYSS
gm024849_Glyma0 AQNDNFFSKSYNFSKEAYQSSLPLPKLLFSEWLSVDQ-----------------------
gm045185_Glyma1 AHNDNFFSQSYNFSKEACQSSLPLPKLLFSEWLSVDQVDGGSSVNSDDSLVLGNEFDQNS
gm054830_Glyma2 --------LNYNFTKEASQSS--LPKLLFAEWLSLDHLN---SANSVDSLGLRNGFDQNS
                         . *           ****:*:**:*                          

AT5G52260.1     AFTDSKHINETQDQINEEEVMMINNNNYSSLEDVMLR-------TDFLQ--PDHEYANYY
gm024849_Glyma0 -----------------EYHNRLIHSSTTEVYNSQIKSTNQMDGSDFMNCIPGNELRSNF
gm045185_Glyma1 TFQEAIMH-MLEENFGEEYHNSLIHSSTTEVYNSQLKSTNQVDGSDFINCIPGNELCSNF
gm054830_Glyma2 SFHEAAIHDMSEVPFGGEYNRCVSNISAPEMFNSQLKYGNQMVENGYIHCMPGVDLSSNF
                                 *    : : . ..: :  ::       ..:::  *. :  . :

AT5G52260.1     SSGDFFINSDQNYV-------
gm024849_Glyma0 S----LTNHGELEGEEYNAIP
gm045185_Glyma1 S----LTNHAM----------
gm054830_Glyma2 S----ISNDAIMYI-------
                *    : *
BoxShade v3.31 C (beta, 970507) Output
AT5G52260.1     - M T K S G E R P K Q R Q R K G L W S P E E D Q K L K S F I L S R G H A C W T T V P I L A G L Q R N G K S C R L R W I N
gm024849_Glyma0    M E S K P L E K A K P K Y R K G L W S P E E D N K L R N H I I K H G H G C W S S V P I K A G L Q R N G K S C R L R W I N
gm045185_Glyma1    M E S Q P L E K A K P K Y R K G L W S P E E D N K L R N H I I K H G H G C W S S V P I K A G L Q R N G K S C R L R W I N
gm054830_Glyma2    M G Y Q P L E K G K P K H K K G L W S P E E D N K L R N H I L K H G H G C W S S V P I K A G L Q R N G K S C R L R W I N
 
AT5G52260.1     Y L R P G L K R G S F S E E E E E T I L T L H S S L G N K W S R I A K Y L P G R T D N E I K N Y W H S Y L K K R W L K S
gm024849_Glyma0    Y L R P G L K R G V F S K H E K D T I M A L H H M L G N K W S Q I A Q H L P G R T D N E V K N Y W H S Y L K K K V I K A
gm045185_Glyma1    Y L R P G L K R G V F S K H E E D T I M V L H H M L G N K W S Q I A Q H L P G R T D N E I K N Y W H S Y L K K K E I K A
gm054830_Glyma2    Y L R P G L K R G K F S K Q E E E T I L T L H H M L G N K W S R I S Q H L P G R T D N E I K N Y W H S Y L K K R V A K A
 
AT5G52260.1     Q P Q L K S Q I S D L T E S P S S L L S C G K R N L E T E T L D H V I S F Q K F S E N P T S S P - - - - - - - - - - S K
gm024849_Glyma0    K - E M E S D - K Q I Q H A G S S - - - - - - - - - - S D T V E N A L S P Q K L A - - - T Q D S S Y G L L E N L D K S I
gm045185_Glyma1    K - E M E S D - K E I Q H A S S S - - - - - - - - - - S D T M E N S L S P Q K L A - - - T Q D P S Y S L L E N L D K S I
gm054830_Glyma2    K - E M E S H - N Q I K Y A S S S - - - - - - - - - - S D T M D S S H S L Q N L A - - - T Q C P - - - - - - - - - - - -
 
AT5G52260.1     E S N N N M I M N N S N - - - - - - - - - - N L P K L F F S E W I S - - - - - - - - S S N P - - - - - - - - H I D Y S S
gm024849_Glyma0    A Q N D N F F S K S Y N F S K E A Y Q S S L P L P K L L F S E W L S V D Q - - - - - - - - - - - - - - - - - - - - - - -
gm045185_Glyma1    A H N D N F F S Q S Y N F S K E A C Q S S L P L P K L L F S E W L S V D Q V D G G S S V N S D D S L V L G N E F D Q N S
gm054830_Glyma2    - - - - - - - - L N Y N F T K E A S Q S S - - L P K L L F A E W L S L D H L N - - - S A N S V D S L G L R N G F D Q N S
 
AT5G52260.1     A F T D S K H I N E T Q D Q I N E E E V M M I N N N N Y S S L E D V M L R - - - - - - - T D F L Q - - P D H E Y A N Y Y
gm024849_Glyma0    - - - - - - - - - - - - - - - - - E Y H N R L I H S S T T E V Y N S Q I K S T N Q M D G S D F M N C I P G N E L R S N F
gm045185_Glyma1    T F Q E A I M H - M L E E N F G E E Y H N S L I H S S T T E V Y N S Q L K S T N Q V D G S D F I N C I P G N E L C S N F
gm054830_Glyma2    S F H E A A I H D M S E V P F G G E Y N R C V S N I S A P E M F N S Q L K Y G N Q M V E N G Y I H C M P G V D L S S N F
 
AT5G52260.1     S S G D F F I N S D Q N Y V - - - - - - -
gm024849_Glyma0    S - - - - L T N H G E L E G E E Y N A I P
gm045185_Glyma1    S - - - - L T N H A M - - - - - - - - - -
gm054830_Glyma2    S - - - - I S N D A I M Y I - - - - - - -
 
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