fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os018211 not found in 273aa AT5G52260.1 1st_1st 0.387878787 Ib
Sb014340 not found in 298aa AT5G52260.1 1st_1st 0.381818181 Ib
Gm028639 not found in 270aa AT3G48920.1 1st_not 0.412121212 II
Gm054830 not found in 270aa AT3G48920.1 not_not 0.410101010 III
Gm045185 not found in 291aa AT4G25560.1 not_not 0.406060606 III
Gm024849 not found in 262aa AT4G25560.1 not_not 0.402020202 III
Pt027423 not found in 295aa AT5G52260.1 1st_1st 0.424242424 Ia
Pt022949 not found in 325aa AT5G52260.1 not_1st 0.4 II
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Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G52260.1     ---------------------------------MTK----SGERPKQRQRKGLWSPEEDQ
gm028639_Glyma1 --------------------------------MGFQ----PMEKGKAKHKKGLWSPEEDN
gm045185_Glyma1 --------------------------------MESQ----PLEKAKPKYRKGLWSPEEDN
gm054830_Glyma2 --------------------------------MGYQ----PLEKGKPKHKKGLWSPEEDN
Os018211_Os04t0 --------------------------------MGCK----ACQKPKVHYRKGLWSPEEDQ
gm024849_Glyma0 --------------------------------MESK----PLEKAKPKYRKGLWSPEEDN
pt022949_POPTR_ MPKAFIASITKSKTLFLLYKSPILLIIGVLGEMGCKSSDKP--KPKLRHRKGLWSPEEDQ
pt027423_POPTR_ --------------------------------MGCKSSDMPKLKPKPKHRKGLWSPEEDQ
Sb014340_Sorbi1 --------------------------------MGCK----ACQKPKVQYRKGLWSPEEDE
                                                   :    .  : * : :*********:

AT5G52260.1     KLKSFILSRGHACWTTVPILAGLQRNGKSCRLRWINYLRPGLKRGSFSEEEEETILTLHS
gm028639_Glyma1 KLRNHILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGKFSKQEEETILTLHD
gm045185_Glyma1 KLRNHIIKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGVFSKHEEDTIMVLHH
gm054830_Glyma2 KLRNHILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGKFSKQEEETILTLHH
Os018211_Os04t0 KLRDFILRYGHGCWSAVPVKAGLQRNGKSCRLRWINYLRPGLKHGMFSREEEETVMNLHA
gm024849_Glyma0 KLRNHIIKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGVFSKHEKDTIMALHH
pt022949_POPTR_ RLGSYVFQHGHGCWSSVPINAGLQRTGKSCRLRWINYLRPGLKRGAFSTDEEETILTLHR
pt027423_POPTR_ RLRNYVLKHGHGCWSSVPINAGLQRNGKSCRLRWINYLRPGLKRGTFSAQEEETILALHH
Sb014340_Sorbi1 KLRDYILRYGHGCWSALPLKAGLQRNGKSCRLRWINYLRPGLKHGVFSREEEETVMSLHA
                :* ..::  **.**:::*: *****.*****************:* ** .*::*:: ** 

AT5G52260.1     SLGNKWSRIAKYLPGRTDNEIKNYWHSYLKKRWLKSQPQLKSQISDLTESPSSLLSCGKR
gm028639_Glyma1 MLGNKWSQISQHLPGRTDNEIKNYWHSYLKKRVAKAKEMESHNQIKYASSSSDTIDSSNS
gm045185_Glyma1 MLGNKWSQIAQHLPGRTDNEIKNYWHSYLKKKEIKAKEMESDKEIQHASSSSDTMENSLS
gm054830_Glyma2 MLGNKWSRISQHLPGRTDNEIKNYWHSYLKKRVAKAKEMESHNQIKYASSSSDTMDSSHS
Os018211_Os04t0 TMGNKWSQIARHLPGRTDNEVKNYWNSYLKKRV-EGAEAAARKSAEPA----DVVTGSPN
gm024849_Glyma0 MLGNKWSQIAQHLPGRTDNEVKNYWHSYLKKKVIKAKEMESDKQIQHAGSSSDTVENALS
pt022949_POPTR_ MLGNKWSQIAQHLPGRTDNEIKNHWHSYLKKKLFKAEGMESPNKTQSASSNSDNMDLSPS
pt027423_POPTR_ MLGNKWSQIAQHLPGRTDNEIKNHWHSYLKKNLLKDEGMESLKRTKSDSSNSDIMELSPS
Sb014340_Sorbi1 KLGNKWSQIARHLPGRTDNEVKNYWNSYLKKRV-EGGAQGKHGAADPATPGRSDVHGSPD
                 :*****:*:::********:**:*:*****.  :          .      . :  .  

AT5G52260.1     N-----------------------LETETLDHVISFQKFSENPTSSPS--KESNNNMIMN
gm028639_Glyma1 I------QKLATQGQ-----------------------QIYNFTKESC---QSS------
gm045185_Glyma1 P------QKLATQDPSYSLLEN--LDKSIAHNDNFF-SQSYNFSKEAC---QSSL-----
gm054830_Glyma2 L------QNLATQCP-----------------------LNYNFTKEAS---QSS------
Os018211_Os04t0 R-SETGQERVAADRPASSESSGP-VESSSADDSSSL--------TEP----AAGLAAVRP
gm024849_Glyma0 P------QKLATQDSSYGLLEN--LDKSIAQNDNFF-SKSYNFSKEAY---QSSL-----
pt022949_POPTR_ P------KRLKMQSP--ESSMN--MEKPSTDIDRPVLPRMFDYLKEPN---RSSL-----
pt027423_POPTR_ P------KRLKMQASSFESSMS--AEKSSADINRSV-PQMFESPNEPK---GSSL-----
Sb014340_Sorbi1 DPSENNGQGSVVSRPANSDSSEPAVESSSADDSSCL------TVTEPAGARASATAAVRP
                                                            ...     :       

AT5G52260.1     NSNNLPKLFFSEWISSSNPH----------------ID-------YSSAFTDSKHINETQ
gm028639_Glyma1 ----LPKLLFAEWLSLDHVN---SANSVESLGLRNGFD-------HNSTFQE--------
gm045185_Glyma1 ---PLPKLLFSEWLSVDQVDGGSSVNSDDSLVLGNEFD-------QNSTFQE--------
gm054830_Glyma2 ----LPKLLFAEWLSLDHLN---SANSVDSLGLRNGFD-------QNSSFHE--------
Os018211_Os04t0 HAPVIPKVMFADWFDMDYGT--SLAGTAP-----------------GLSYQGSSSV----
gm024849_Glyma0 ---PLPKLLFSEWLSVDQ------------------------------------------
pt022949_POPTR_ ----LPKVMFAEWLSLDS-----FASSGEPVVSKSTFD-------HNPSFQD--------
pt027423_POPTR_ ----LPKVMFAEWLSLES-----FASLGEPMDSKTTLD-------HNTIFQD--------
Sb014340_Sorbi1 HAPVLPKVMFADWLDMDYGT--SLVALGPDAGV---FDVGGRSPAQGLSHQG-SSV----
                    :**::*::*:. .                                           

AT5G52260.1     DQINEEEVMMINNNNYSSLED-VMLRTDFLQPDHEYANYYSSGDFFINSDQNYV------
gm028639_Glyma1 ----------------AAIHD--MSEVPFGGDYNRCVSNIPAPEMF-NSQLKYANQMVEN
gm045185_Glyma1 ----------------AIMH---MLEENFGEEYHNSLIHSSTTEVY-NSQLKSTNQVDGS
gm054830_Glyma2 ----------------AAIHD--MSEVPFGGEYNRCVSNISAPEMF-NSQLKYGNQMVEN
Os018211_Os04t0 ------QVDVPCGGAVDSLHG--LGDGGFCWDFDDAADHM--------------------
gm024849_Glyma0 -------------------------------EYHNRLIHSSTTEVY-NSQIKSTNQMDGS
pt022949_POPTR_ ---------------TSFMHHYLLEEGAFGGDYQNSLSDGSSGDIF-SSEFKFESQSPGN
pt027423_POPTR_ ----------------NFLHDYLLDERAFGGEYHNSLSDGSSGDIF-SSEFRFESQSPGN
Sb014340_Sorbi1 ------QVDGPSCGAVDSLHG--L--GGMCWEFDAAADQL--------------------
                                                 .                          

AT5G52260.1     ---------------------------------
gm028639_Glyma1 GYIHCMPGFDLSSNFSMSNDA-IMYI-------
gm045185_Glyma1 DFINCIPGNELCSNFSLTNHA-M----------
gm054830_Glyma2 GYIHCMPGVDLSSNFSISNDA-IMYI-------
Os018211_Os04t0 -----QGGGGLCDLLSMSEFLGIN---------
gm024849_Glyma0 DFMNCIPGNELRSNFSLTNHG-ELEGEEYNAIP
pt022949_POPTR_ EF-DFSSGEDLCREFNFRNIGDVMYI-------
pt027423_POPTR_ EF-DFSSGEDLCSDFNLSNISDVMYI-------
Sb014340_Sorbi1 ---DVQGGGGFCDLLSMSEFLGIN---------
BoxShade v3.31 C (beta, 970507) Output
AT5G52260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M T K - - - - S G E R P K Q R Q R K G L W S P E E D Q
gm028639_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G F Q - - - - P M E K G K A K H K K G L W S P E E D N
gm045185_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E S Q - - - - P L E K A K P K Y R K G L W S P E E D N
gm054830_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G Y Q - - - - P L E K G K P K H K K G L W S P E E D N
Os018211_Os04t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G C K - - - - A C Q K P K V H Y R K G L W S P E E D Q
gm024849_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E S K - - - - P L E K A K P K Y R K G L W S P E E D N
pt022949_POPTR_    M P K A F I A S I T K S K T L F L L Y K S P I L L I I G V L G E M G C K S S D K P - - K P K L R H R K G L W S P E E D Q
pt027423_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G C K S S D M P K L K P K P K H R K G L W S P E E D Q
Sb014340_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G C K - - - - A C Q K P K V Q Y R K G L W S P E E D E
 
AT5G52260.1     K L K S F I L S R G H A C W T T V P I L A G L Q R N G K S C R L R W I N Y L R P G L K R G S F S E E E E E T I L T L H S
gm028639_Glyma1    K L R N H I L K H G H G C W S S V P I K A G L Q R N G K S C R L R W I N Y L R P G L K R G K F S K Q E E E T I L T L H D
gm045185_Glyma1    K L R N H I I K H G H G C W S S V P I K A G L Q R N G K S C R L R W I N Y L R P G L K R G V F S K H E E D T I M V L H H
gm054830_Glyma2    K L R N H I L K H G H G C W S S V P I K A G L Q R N G K S C R L R W I N Y L R P G L K R G K F S K Q E E E T I L T L H H
Os018211_Os04t0    K L R D F I L R Y G H G C W S A V P V K A G L Q R N G K S C R L R W I N Y L R P G L K H G M F S R E E E E T V M N L H A
gm024849_Glyma0    K L R N H I I K H G H G C W S S V P I K A G L Q R N G K S C R L R W I N Y L R P G L K R G V F S K H E K D T I M A L H H
pt022949_POPTR_    R L G S Y V F Q H G H G C W S S V P I N A G L Q R T G K S C R L R W I N Y L R P G L K R G A F S T D E E E T I L T L H R
pt027423_POPTR_    R L R N Y V L K H G H G C W S S V P I N A G L Q R N G K S C R L R W I N Y L R P G L K R G T F S A Q E E E T I L A L H H
Sb014340_Sorbi1    K L R D Y I L R Y G H G C W S A L P L K A G L Q R N G K S C R L R W I N Y L R P G L K H G V F S R E E E E T V M S L H A
 
AT5G52260.1     S L G N K W S R I A K Y L P G R T D N E I K N Y W H S Y L K K R W L K S Q P Q L K S Q I S D L T E S P S S L L S C G K R
gm028639_Glyma1    M L G N K W S Q I S Q H L P G R T D N E I K N Y W H S Y L K K R V A K A K E M E S H N Q I K Y A S S S S D T I D S S N S
gm045185_Glyma1    M L G N K W S Q I A Q H L P G R T D N E I K N Y W H S Y L K K K E I K A K E M E S D K E I Q H A S S S S D T M E N S L S
gm054830_Glyma2    M L G N K W S R I S Q H L P G R T D N E I K N Y W H S Y L K K R V A K A K E M E S H N Q I K Y A S S S S D T M D S S H S
Os018211_Os04t0    T M G N K W S Q I A R H L P G R T D N E V K N Y W N S Y L K K R V - E G A E A A A R K S A E P A - - - - D V V T G S P N
gm024849_Glyma0    M L G N K W S Q I A Q H L P G R T D N E V K N Y W H S Y L K K K V I K A K E M E S D K Q I Q H A G S S S D T V E N A L S
pt022949_POPTR_    M L G N K W S Q I A Q H L P G R T D N E I K N H W H S Y L K K K L F K A E G M E S P N K T Q S A S S N S D N M D L S P S
pt027423_POPTR_    M L G N K W S Q I A Q H L P G R T D N E I K N H W H S Y L K K N L L K D E G M E S L K R T K S D S S N S D I M E L S P S
Sb014340_Sorbi1    K L G N K W S Q I A R H L P G R T D N E V K N Y W N S Y L K K R V - E G G A Q G K H G A A D P A T P G R S D V H G S P D
 
AT5G52260.1     N - - - - - - - - - - - - - - - - - - - - - - - L E T E T L D H V I S F Q K F S E N P T S S P S - - K E S N N N M I M N
gm028639_Glyma1    I - - - - - - Q K L A T Q G Q - - - - - - - - - - - - - - - - - - - - - - - Q I Y N F T K E S C - - - Q S S - - - - - -
gm045185_Glyma1    P - - - - - - Q K L A T Q D P S Y S L L E N - - L D K S I A H N D N F F - S Q S Y N F S K E A C - - - Q S S L - - - - -
gm054830_Glyma2    L - - - - - - Q N L A T Q C P - - - - - - - - - - - - - - - - - - - - - - - L N Y N F T K E A S - - - Q S S - - - - - -
Os018211_Os04t0    R - S E T G Q E R V A A D R P A S S E S S G P - V E S S S A D D S S S L - - - - - - - - T E P - - - - A A G L A A V R P
gm024849_Glyma0    P - - - - - - Q K L A T Q D S S Y G L L E N - - L D K S I A Q N D N F F - S K S Y N F S K E A Y - - - Q S S L - - - - -
pt022949_POPTR_    P - - - - - - K R L K M Q S P - - E S S M N - - M E K P S T D I D R P V L P R M F D Y L K E P N - - - R S S L - - - - -
pt027423_POPTR_    P - - - - - - K R L K M Q A S S F E S S M S - - A E K S S A D I N R S V - P Q M F E S P N E P K - - - G S S L - - - - -
Sb014340_Sorbi1    D P S E N N G Q G S V V S R P A N S D S S E P A V E S S S A D D S S C L - - - - - - T V T E P A G A R A S A T A A V R P
 
AT5G52260.1     N S N N L P K L F F S E W I S S S N P H - - - - - - - - - - - - - - - - I D - - - - - - - Y S S A F T D S K H I N E T Q
gm028639_Glyma1    - - - - L P K L L F A E W L S L D H V N - - - S A N S V E S L G L R N G F D - - - - - - - H N S T F Q E - - - - - - - -
gm045185_Glyma1    - - - P L P K L L F S E W L S V D Q V D G G S S V N S D D S L V L G N E F D - - - - - - - Q N S T F Q E - - - - - - - -
gm054830_Glyma2    - - - - L P K L L F A E W L S L D H L N - - - S A N S V D S L G L R N G F D - - - - - - - Q N S S F H E - - - - - - - -
Os018211_Os04t0    H A P V I P K V M F A D W F D M D Y G T - - S L A G T A P - - - - - - - - - - - - - - - - - G L S Y Q G S S S V - - - -
gm024849_Glyma0    - - - P L P K L L F S E W L S V D Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt022949_POPTR_    - - - - L P K V M F A E W L S L D S - - - - - F A S S G E P V V S K S T F D - - - - - - - H N P S F Q D - - - - - - - -
pt027423_POPTR_    - - - - L P K V M F A E W L S L E S - - - - - F A S L G E P M D S K T T L D - - - - - - - H N T I F Q D - - - - - - - -
Sb014340_Sorbi1    H A P V L P K V M F A D W L D M D Y G T - - S L V A L G P D A G V - - - F D V G G R S P A Q G L S H Q G - S S V - - - -
 
AT5G52260.1     D Q I N E E E V M M I N N N N Y S S L E D - V M L R T D F L Q P D H E Y A N Y Y S S G D F F I N S D Q N Y V - - - - - -
gm028639_Glyma1    - - - - - - - - - - - - - - - - A A I H D - - M S E V P F G G D Y N R C V S N I P A P E M F - N S Q L K Y A N Q M V E N
gm045185_Glyma1    - - - - - - - - - - - - - - - - A I M H - - - M L E E N F G E E Y H N S L I H S S T T E V Y - N S Q L K S T N Q V D G S
gm054830_Glyma2    - - - - - - - - - - - - - - - - A A I H D - - M S E V P F G G E Y N R C V S N I S A P E M F - N S Q L K Y G N Q M V E N
Os018211_Os04t0    - - - - - - Q V D V P C G G A V D S L H G - - L G D G G F C W D F D D A A D H M - - - - - - - - - - - - - - - - - - - -
gm024849_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E Y H N R L I H S S T T E V Y - N S Q I K S T N Q M D G S
pt022949_POPTR_    - - - - - - - - - - - - - - - T S F M H H Y L L E E G A F G G D Y Q N S L S D G S S G D I F - S S E F K F E S Q S P G N
pt027423_POPTR_    - - - - - - - - - - - - - - - - N F L H D Y L L D E R A F G G E Y H N S L S D G S S G D I F - S S E F R F E S Q S P G N
Sb014340_Sorbi1    - - - - - - Q V D G P S C G A V D S L H G - - L - - G G M C W E F D A A A D Q L - - - - - - - - - - - - - - - - - - - -
 
AT5G52260.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm028639_Glyma1    G Y I H C M P G F D L S S N F S M S N D A - I M Y I - - - - - - -
gm045185_Glyma1    D F I N C I P G N E L C S N F S L T N H A - M - - - - - - - - - -
gm054830_Glyma2    G Y I H C M P G V D L S S N F S I S N D A - I M Y I - - - - - - -
Os018211_Os04t0    - - - - - Q G G G G L C D L L S M S E F L G I N - - - - - - - - -
gm024849_Glyma0    D F M N C I P G N E L R S N F S L T N H G - E L E G E E Y N A I P
pt022949_POPTR_    E F - D F S S G E D L C R E F N F R N I G D V M Y I - - - - - - -
pt027423_POPTR_    E F - D F S S G E D L C S D F N L S N I S D V M Y I - - - - - - -
Sb014340_Sorbi1    - - - D V Q G G G G F C D L L S M S E F L G I N - - - - - - - - -
 
0