fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os018211 not found in 273aa AT5G52260.1 1st_1st 0.387878787 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G52260.1     -MTKSGERPKQRQRKGLWSPEEDQKLKSFILSRGHACWTTVPILAGLQRNGKSCRLRWIN
Os018211_Os04t0 MGCKACQKPKVHYRKGLWSPEEDQKLRDFILRYGHGCWSAVPVKAGLQRNGKSCRLRWIN
                   *: ::** : *************:.***  **.**::**: ****************

AT5G52260.1     YLRPGLKRGSFSEEEEETILTLHSSLGNKWSRIAKYLPGRTDNEIKNYWHSYLKKRWLKS
Os018211_Os04t0 YLRPGLKHGMFSREEEETVMNLHATMGNKWSQIARHLPGRTDNEVKNYWNSYLKKRVEGA
                *******:* **.*****::.**:::*****:**::********:****:******   :

AT5G52260.1     QPQLKSQISDLTESPSSLLSCGKRNLETETLDHVISFQKFSENPTSSPSKESNNNMIMNN
Os018211_Os04t0 EAAARK-----SAEPADVVT-GSPN-RSETGQERVAADRPASSESSGPVESSS----ADD
                :.  :.     : .*:.::: *. * .:** :. :: :: :.. :*.* :.*.     ::

AT5G52260.1     SNNL-----------------PKLFFSEW--------ISSSNPHIDYSSAFT--------
Os018211_Os04t0 SSSLTEPAAGLAAVRPHAPVIPKVMFADWFDMDYGTSLAGTAPGLSYQGSSSVQVDVPCG
                *..*                 **::*::*        ::.: * :.*..: :        

AT5G52260.1     ---DSKH----------INETQDQINEEEVMMINNNNYSSLEDVMLRTDFLQPDHEYANY
Os018211_Os04t0 GAVDSLHGLGDGGFCWDFDDAADHM----------QGGGGLCDLLSMSEFLG--------
                   ** *          :::: *::          :. ..* *::  ::**         

AT5G52260.1     YSSGDFFINSDQNYV
Os018211_Os04t0 -------IN------
                       **
BoxShade v3.31 C (beta, 970507) Output
AT5G52260.1     - M T K S G E R P K Q R Q R K G L W S P E E D Q K L K S F I L S R G H A C W T T V P I L A G L Q R N G K S C R L R W I N
Os018211_Os04t0    M G C K A C Q K P K V H Y R K G L W S P E E D Q K L R D F I L R Y G H G C W S A V P V K A G L Q R N G K S C R L R W I N
 
AT5G52260.1     Y L R P G L K R G S F S E E E E E T I L T L H S S L G N K W S R I A K Y L P G R T D N E I K N Y W H S Y L K K R W L K S
Os018211_Os04t0    Y L R P G L K H G M F S R E E E E T V M N L H A T M G N K W S Q I A R H L P G R T D N E V K N Y W N S Y L K K R V E G A
 
AT5G52260.1     Q P Q L K S Q I S D L T E S P S S L L S C G K R N L E T E T L D H V I S F Q K F S E N P T S S P S K E S N N N M I M N N
Os018211_Os04t0    E A A A R K - - - - - S A E P A D V V T - G S P N - R S E T G Q E R V A A D R P A S S E S S G P V E S S S - - - - A D D
 
AT5G52260.1     S N N L - - - - - - - - - - - - - - - - - P K L F F S E W - - - - - - - - I S S S N P H I D Y S S A F T - - - - - - - -
Os018211_Os04t0    S S S L T E P A A G L A A V R P H A P V I P K V M F A D W F D M D Y G T S L A G T A P G L S Y Q G S S S V Q V D V P C G
 
AT5G52260.1     - - - D S K H - - - - - - - - - - I N E T Q D Q I N E E E V M M I N N N N Y S S L E D V M L R T D F L Q P D H E Y A N Y
Os018211_Os04t0    G A V D S L H G L G D G G F C W D F D D A A D H M - - - - - - - - - - Q G G G G L C D L L S M S E F L G - - - - - - - -
 
AT5G52260.1     Y S S G D F F I N S D Q N Y V
Os018211_Os04t0    - - - - - - - I N - - - - - -
 
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