fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb014340 not found in 298aa AT5G52260.1 1st_1st 0.381818181 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G52260.1     -MTKSGERPKQRQRKGLWSPEEDQKLKSFILSRGHACWTTVPILAGLQRNGKSCRLRWIN
Sb014340_Sorbi1 MGCKACQKPKVQYRKGLWSPEEDEKLRDYILRYGHGCWSALPLKAGLQRNGKSCRLRWIN
                   *: ::** : **********:**:.:**  **.**:::*: ****************

AT5G52260.1     YLRPGLKRGSFSEEEEETILTLHSSLGNKWSRIAKYLPGRTDNEIKNYWHSYLKKRWLKS
Sb014340_Sorbi1 YLRPGLKHGVFSREEEETVMSLHAKLGNKWSQIARHLPGRTDNEVKNYWNSYLKKR-VEG
                *******:* **.*****:::**:.******:**::********:****:****** ::.

AT5G52260.1     QPQLKSQISD-LTESPSSLLSCGKRNLETETLDHVISFQKFSENPTSSPSKESNN-----
Sb014340_Sorbi1 GAQGKHGAADPATPGRSDVHGSPDDPSENNGQGSVVS--RPANSDSSEPAVESSSADDSS
                 .* *   :*  * . *.: .. .   *.:  . *:*  : ::. :*.*: **..     

AT5G52260.1     ---------------NMIMNNSNNLPKLFFSEWISSSNPHIDYSSAF-------------
Sb014340_Sorbi1 CLTVTEPAGARASATAAVRPHAPVLPKVMFADWLD-----MDYGTSLVALGPDAGVFDVG
                                 :  ::  ***::*::*:.     :**.:::             

AT5G52260.1     ------------------------TDSKH--------INETQDQINEEEVMMINNNNYSS
Sb014340_Sorbi1 GRSPAQGLSHQGSSVQVDGPSCGAVDSLHGLGGMCWEFDAAADQLD--------------
                                        .** *        :: : **::              

AT5G52260.1     LEDVMLRTDFLQPDHEYANYYSSGDFF-INSDQNYV
Sb014340_Sorbi1 ----------VQGGGGFCDLLSMSEFLGIN------
                          :* .  :.:  * .:*: **
BoxShade v3.31 C (beta, 970507) Output
AT5G52260.1     - M T K S G E R P K Q R Q R K G L W S P E E D Q K L K S F I L S R G H A C W T T V P I L A G L Q R N G K S C R L R W I N
Sb014340_Sorbi1    M G C K A C Q K P K V Q Y R K G L W S P E E D E K L R D Y I L R Y G H G C W S A L P L K A G L Q R N G K S C R L R W I N
 
AT5G52260.1     Y L R P G L K R G S F S E E E E E T I L T L H S S L G N K W S R I A K Y L P G R T D N E I K N Y W H S Y L K K R W L K S
Sb014340_Sorbi1    Y L R P G L K H G V F S R E E E E T V M S L H A K L G N K W S Q I A R H L P G R T D N E V K N Y W N S Y L K K R - V E G
 
AT5G52260.1     Q P Q L K S Q I S D - L T E S P S S L L S C G K R N L E T E T L D H V I S F Q K F S E N P T S S P S K E S N N - - - - -
Sb014340_Sorbi1    G A Q G K H G A A D P A T P G R S D V H G S P D D P S E N N G Q G S V V S - - R P A N S D S S E P A V E S S S A D D S S
 
AT5G52260.1     - - - - - - - - - - - - - - - N M I M N N S N N L P K L F F S E W I S S S N P H I D Y S S A F - - - - - - - - - - - - -
Sb014340_Sorbi1    C L T V T E P A G A R A S A T A A V R P H A P V L P K V M F A D W L D - - - - - M D Y G T S L V A L G P D A G V F D V G
 
AT5G52260.1     - - - - - - - - - - - - - - - - - - - - - - - - T D S K H - - - - - - - - I N E T Q D Q I N E E E V M M I N N N N Y S S
Sb014340_Sorbi1    G R S P A Q G L S H Q G S S V Q V D G P S C G A V D S L H G L G G M C W E F D A A A D Q L D - - - - - - - - - - - - - -
 
AT5G52260.1     L E D V M L R T D F L Q P D H E Y A N Y Y S S G D F F - I N S D Q N Y V
Sb014340_Sorbi1    - - - - - - - - - - V Q G G G G F C D L L S M S E F L G I N - - - - - -
 
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