fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52600.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028311 not found in 215aa AT3G13540.1 1st_not 0.422330097 II
Gm055101 not found in 274aa AT3G13540.1 not_not 0.419902912 III
Gm053348 not found in 281aa AT3G13540.1 not_not 0.415048543 III
Gm046082 not found in 242aa AT5G35550.1 not_not 0.415048543 III
Gm035597 not found in 319aa AT2G47460.1 not_not 0.415048543 III
Gm055102 not found in 214aa AT3G13540.1 not_not 0.415048543 III
Gm043627 not found in 293aa AT5G49330.1 not_not 0.407766990 III
Gm017550 not found in 290aa AT5G49330.1 not_not 0.407766990 III

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G52600.1     ---ME--CKREEGKSYVKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRL
gm055101_Glyma2 MGRKA-NCDNQYA---MNRGPWSAEEDKILMNYVQVHGEGKWRELSKRAGLKRCGKSCRL
gm017550_Glyma0 MGRAP--CCSKVG---LHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRL
gm043627_Glyma1 MGRAP--CCSKVG---LHKGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRL
gm055102_Glyma2 MKRKGRSCDNQDA---VNRGPWSAEEDQILINYVQVHGEGNWRELSKRAGLKRLGKSCRL
gm046082_Glyma1 MGRSP--CCSKEG---LNRGAWTAHEDKILREYIRVHGEGRWRNLPKRAGLKRCGKSCRL
gm035597_Glyma1 MGRSP--CCSKEG---LNRGAWTAHEDKILREYIRVHGEGRWRNLPKRAGLKRCGKSCRL
gm053348_Glyma1 MGRAP--CCSKVG---LHRGPWTPREDALLTKYIQTHGEGQWRSLPKRAGLLRCGKSCRL
gm028311_Glyma1 MKRKAMSCDNRDA---VNRGAWSAEEDQILINYVQAHGEGNWRELSKRAGLKRRGKSCRL
                       *  . .   :::* *...** :* .*:..****.* .:.:::** * ******

AT5G52600.1     RWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK
gm055101_Glyma2 RWLNYLKPDIKRGNISSDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKK
gm017550_Glyma0 RWMNYLRPDIKRGNITPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKK
gm043627_Glyma1 RWMNYLRPDIKRGNIAPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKK
gm055102_Glyma2 RWLNYLKPDIKRGNISSDEEDLIIRLHSLLGNRWSLIAGRLPGRTDHEIKNYWNTYLRKK
gm046082_Glyma1 RWLNYLRPDIKRGNISPDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKK
gm035597_Glyma1 RWLNYLRPDIKRGNISPDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKK
gm053348_Glyma1 RWMNYLRPDIKRGNITPEEDDLIVRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKK
gm028311_Glyma1 RWLNYLKPDIKRGNISSDEEDLIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKK
                ** ***:*:****.::.:*::**:*:*.******************:*:****** * **

AT5G52600.1     --------------------------------PNSRRQNA--------------------
gm055101_Glyma2 AEHKHD---KIPSHNDNIPIKLRIES------PGCSK----------NSFGNVLDPTK-S
gm017550_Glyma0 LKIQGTEDTDTH-NMLENPQEEPASDGGNNN--KKKKKNGGKK---KNKGKDNAEPPK-T
gm043627_Glyma1 LKIQGTEDTDTH-KMLENPQEEAASDGGNNNKKKKKKKNGGKKNKQKNKGKENDEPPK-T
gm055102_Glyma2 VEQNHNYN-NLPGH-NNIPIKLRIES------PRCSK----------NSLGIVIDPTK-S
gm046082_Glyma1 VKDGHQ---TTTGNNTQNPM------------PNPSP---------------SLSPPKLD
gm035597_Glyma1 VKDGHQ----TTANNTQNPM------------PHLAPI-------HMATSSISLSPPKLD
gm053348_Glyma1 LRNQGT-DPKTHDKLTEAPEKK-----------KGKKKNKQKN--ENNKGSE-----K-T
gm028311_Glyma1 VEQNHNYNSNLPGH-DNIPIKLRIES------PRRSK----------NSLGIVIDPTK-S
                                                                            

AT5G52600.1     ----PESI-VGA----------TPFTDKPVMSTE--LRRSHGEGGEEESN----------
gm055101_Glyma2 ----PHP-----MRCTKVMM---PVNDS--------VNTTNLITTSWDNH----------
gm017550_Glyma0 QVYLPKPIRVKAMY--------LQRTDSNTFTFDSNSNSASGSTSQEKDE----------
gm043627_Glyma1 QVYLPKPIRVKAMY--------LQRTDSNTFTFD--SNSASGSTSQEKEE----------
gm055102_Glyma2 ----SHPVTIKSMSCTEVMM---P------------TRTVNDFTTSWDK-----------
gm046082_Glyma1 ----SHVVRTKATKCSKLLFLNPPPH----------PSMQNKFKTEAEEE----------
gm035597_Glyma1 ----SRVVRTKATKCSKVLFLNPPPH----------PSMPNKSKTEAEAEARLVDGVISN
gm053348_Glyma1 LVYLPKPIRVKALSS------CIPRTDS-TLTLN--SNSATASTSEEKVQ----------
gm028311_Glyma1 ----SHPMTIKSMRCTEVMM---P------------TRSVNDFTTSWDI-----------
                    ..                                       . .            

AT5G52600.1     --------TW--------------MEETNHFGYDV-----------------HVGSPLPL
gm055101_Glyma2 --------NPSSASMQ--------LDDYNHCLTGVLQEFDISDLLMS------YEDDFRF
gm017550_Glyma0 --------SPVTKESNVVSEVGNVGEESDGFG--------------------FFSEDHDL
gm043627_Glyma1 --------SPVTKESNVVSEVGNVGEESDGFG--------------------FFSEDHDL
gm055102_Glyma2 --------NPFASTPQ---------DGHGHCSEGFLKHFDISD-----------------
gm046082_Glyma1 -------------------------EEEARL-----------------------------
gm035597_Glyma1 QMEHTTYDNGFLSFP----------DEEKELSTDFLIDFNVGDVCLSDLLNSDFSNTYNF
gm053348_Glyma1 --------SP-EAEVKEVNMVWGVGDDADNGGIEI-----------------FFGEDHDL
gm028311_Glyma1 --------NPSASTPQ---------DGHDHCSEGFLKHFGISD-----------------
                                         :                                  

AT5G52600.1     ----ISHY---------PDNTLVFDPCFS----------------------FTDFFPLL-
gm055101_Glyma2 ---------NGYACVEIPQHIFEDETCR--LDDSLGEEAWYENWKND-------------
gm017550_Glyma0 ----VN---------------ASDIECQSYFPT----------YHGTLQQLYEEYFQLLN
gm043627_Glyma1 ----VN---------------VSDIECHSYFPT----------DHGNLQQLYEEYFQLLN
gm055102_Glyma2 ------------------------------------------------------------
gm046082_Glyma1 ---------QLSPCSDQPDPMFSDEVLKDWTHNNFADEA---NASNNLRSELRRRYRIL-
gm035597_Glyma1 SCTNVNHHEQLSPCSDQPDAMFSDEVLKDWTHSNFADEA---NASNNLHSFISIYIGVFL
gm053348_Glyma1 ----VNN-------------TASYEECYSDVHT---------DDHGTLEKLYEEYLQLLN
gm028311_Glyma1 ------------------------------------------------------------
                                                                            

AT5G52600.1     ------------------------
gm055101_Glyma2 ----PYFPQDQDMGFSSF------
gm017550_Glyma0 -------MDQGQFERNSFAESLLE
gm043627_Glyma1 -------MDHGQFELNSFAESLLD
gm055102_Glyma2 ------------------------
gm046082_Glyma1 ----------RKLKITCS------
gm035597_Glyma1 SVLQPWWLPNRTNK----------
gm053348_Glyma1 -------VEEKPDELDSFAQSLLV
gm028311_Glyma1 ------------------------
                                        


BoxShade v3.31 C (beta, 970507) Output
AT5G52600.1     - - - M E - - C K R E E G K S Y V K R G L W K P E E D M I L K S Y V E T H G E G N W A D I S R R S G L K R G G K S C R L
gm055101_Glyma2    M G R K A - N C D N Q Y A - - - M N R G P W S A E E D K I L M N Y V Q V H G E G K W R E L S K R A G L K R C G K S C R L
gm017550_Glyma0    M G R A P - - C C S K V G - - - L H K G P W T P K E D A L L T K Y I Q A H G E G Q W K S L P K K A G L L R C G K S C R L
gm043627_Glyma1    M G R A P - - C C S K V G - - - L H K G P W T P K E D A L L T K Y I Q A H G E G Q W K S L P K K A G L L R C G K S C R L
gm055102_Glyma2    M K R K G R S C D N Q D A - - - V N R G P W S A E E D Q I L I N Y V Q V H G E G N W R E L S K R A G L K R L G K S C R L
gm046082_Glyma1    M G R S P - - C C S K E G - - - L N R G A W T A H E D K I L R E Y I R V H G E G R W R N L P K R A G L K R C G K S C R L
gm035597_Glyma1    M G R S P - - C C S K E G - - - L N R G A W T A H E D K I L R E Y I R V H G E G R W R N L P K R A G L K R C G K S C R L
gm053348_Glyma1    M G R A P - - C C S K V G - - - L H R G P W T P R E D A L L T K Y I Q T H G E G Q W R S L P K R A G L L R C G K S C R L
gm028311_Glyma1    M K R K A M S C D N R D A - - - V N R G A W S A E E D Q I L I N Y V Q A H G E G N W R E L S K R A G L K R R G K S C R L
 
AT5G52600.1     R W K N Y L R P N I K R G S M S P Q E Q D L I I R M H K L L G N R W S L I A G R L P G R T D N E V K N Y W N T H L N K K
gm055101_Glyma2    R W L N Y L K P D I K R G N I S S D E E D L I I R L H K L L G N R W S L I A G R L P G R T D N E I K N Y W N T Y L R K K
gm017550_Glyma0    R W M N Y L R P D I K R G N I T P E E D D L I I R M H S L L G N R W S L I A G R L P G R T D N E I K N Y W N T H L S K K
gm043627_Glyma1    R W M N Y L R P D I K R G N I A P E E D D L I I R M H S L L G N R W S L I A G R L P G R T D N E I K N Y W N T H L S K K
gm055102_Glyma2    R W L N Y L K P D I K R G N I S S D E E D L I I R L H S L L G N R W S L I A G R L P G R T D H E I K N Y W N T Y L R K K
gm046082_Glyma1    R W L N Y L R P D I K R G N I S P D E E E L I I R L H K L L G N R W S L I A G R L P G R T D N E I K N Y W N T N L G K K
gm035597_Glyma1    R W L N Y L R P D I K R G N I S P D E E E L I I R L H K L L G N R W S L I A G R L P G R T D N E I K N Y W N T N L G K K
gm053348_Glyma1    R W M N Y L R P D I K R G N I T P E E D D L I V R M H S L L G N R W S L I A G R L P G R T D N E I K N Y W N T H L S K K
gm028311_Glyma1    R W L N Y L K P D I K R G N I S S D E E D L I I R L H S L L G N R W S L I A G R L P G R T D N E I K N Y W N T Y L R K K
 
AT5G52600.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P N S R R Q N A - - - - - - - - - - - - - - - - - - - -
gm055101_Glyma2    A E H K H D - - - K I P S H N D N I P I K L R I E S - - - - - - P G C S K - - - - - - - - - - N S F G N V L D P T K - S
gm017550_Glyma0    L K I Q G T E D T D T H - N M L E N P Q E E P A S D G G N N N - - K K K K K N G G K K - - - K N K G K D N A E P P K - T
gm043627_Glyma1    L K I Q G T E D T D T H - K M L E N P Q E E A A S D G G N N N K K K K K K K N G G K K N K Q K N K G K E N D E P P K - T
gm055102_Glyma2    V E Q N H N Y N - N L P G H - N N I P I K L R I E S - - - - - - P R C S K - - - - - - - - - - N S L G I V I D P T K - S
gm046082_Glyma1    V K D G H Q - - - T T T G N N T Q N P M - - - - - - - - - - - - P N P S P - - - - - - - - - - - - - - - S L S P P K L D
gm035597_Glyma1    V K D G H Q - - - - T T A N N T Q N P M - - - - - - - - - - - - P H L A P I - - - - - - - H M A T S S I S L S P P K L D
gm053348_Glyma1    L R N Q G T - D P K T H D K L T E A P E K K - - - - - - - - - - - K G K K K N K Q K N - - E N N K G S E - - - - - K - T
gm028311_Glyma1    V E Q N H N Y N S N L P G H - D N I P I K L R I E S - - - - - - P R R S K - - - - - - - - - - N S L G I V I D P T K - S
 
AT5G52600.1     - - - - P E S I - V G A - - - - - - - - - - T P F T D K P V M S T E - - L R R S H G E G G E E E S N - - - - - - - - - -
gm055101_Glyma2    - - - - P H P - - - - - M R C T K V M M - - - P V N D S - - - - - - - - V N T T N L I T T S W D N H - - - - - - - - - -
gm017550_Glyma0    Q V Y L P K P I R V K A M Y - - - - - - - - L Q R T D S N T F T F D S N S N S A S G S T S Q E K D E - - - - - - - - - -
gm043627_Glyma1    Q V Y L P K P I R V K A M Y - - - - - - - - L Q R T D S N T F T F D - - S N S A S G S T S Q E K E E - - - - - - - - - -
gm055102_Glyma2    - - - - S H P V T I K S M S C T E V M M - - - P - - - - - - - - - - - - T R T V N D F T T S W D K - - - - - - - - - - -
gm046082_Glyma1    - - - - S H V V R T K A T K C S K L L F L N P P P H - - - - - - - - - - P S M Q N K F K T E A E E E - - - - - - - - - -
gm035597_Glyma1    - - - - S R V V R T K A T K C S K V L F L N P P P H - - - - - - - - - - P S M P N K S K T E A E A E A R L V D G V I S N
gm053348_Glyma1    L V Y L P K P I R V K A L S S - - - - - - C I P R T D S - T L T L N - - S N S A T A S T S E E K V Q - - - - - - - - - -
gm028311_Glyma1    - - - - S H P M T I K S M R C T E V M M - - - P - - - - - - - - - - - - T R S V N D F T T S W D I - - - - - - - - - - -
 
AT5G52600.1     - - - - - - - - T W - - - - - - - - - - - - - - M E E T N H F G Y D V - - - - - - - - - - - - - - - - - H V G S P L P L
gm055101_Glyma2    - - - - - - - - N P S S A S M Q - - - - - - - - L D D Y N H C L T G V L Q E F D I S D L L M S - - - - - - Y E D D F R F
gm017550_Glyma0    - - - - - - - - S P V T K E S N V V S E V G N V G E E S D G F G - - - - - - - - - - - - - - - - - - - - F F S E D H D L
gm043627_Glyma1    - - - - - - - - S P V T K E S N V V S E V G N V G E E S D G F G - - - - - - - - - - - - - - - - - - - - F F S E D H D L
gm055102_Glyma2    - - - - - - - - N P F A S T P Q - - - - - - - - - D G H G H C S E G F L K H F D I S D - - - - - - - - - - - - - - - - -
gm046082_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - E E E A R L - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm035597_Glyma1    Q M E H T T Y D N G F L S F P - - - - - - - - - - D E E K E L S T D F L I D F N V G D V C L S D L L N S D F S N T Y N F
gm053348_Glyma1    - - - - - - - - S P - E A E V K E V N M V W G V G D D A D N G G I E I - - - - - - - - - - - - - - - - - F F G E D H D L
gm028311_Glyma1    - - - - - - - - N P S A S T P Q - - - - - - - - - D G H D H C S E G F L K H F G I S D - - - - - - - - - - - - - - - - -
 
AT5G52600.1     - - - - I S H Y - - - - - - - - - P D N T L V F D P C F S - - - - - - - - - - - - - - - - - - - - - - F T D F F P L L -
gm055101_Glyma2    - - - - - - - - - N G Y A C V E I P Q H I F E D E T C R - - L D D S L G E E A W Y E N W K N D - - - - - - - - - - - - -
gm017550_Glyma0    - - - - V N - - - - - - - - - - - - - - - A S D I E C Q S Y F P T - - - - - - - - - - Y H G T L Q Q L Y E E Y F Q L L N
gm043627_Glyma1    - - - - V N - - - - - - - - - - - - - - - V S D I E C H S Y F P T - - - - - - - - - - D H G N L Q Q L Y E E Y F Q L L N
gm055102_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm046082_Glyma1    - - - - - - - - - Q L S P C S D Q P D P M F S D E V L K D W T H N N F A D E A - - - N A S N N L R S E L R R R Y R I L -
gm035597_Glyma1    S C T N V N H H E Q L S P C S D Q P D A M F S D E V L K D W T H S N F A D E A - - - N A S N N L H S F I S I Y I G V F L
gm053348_Glyma1    - - - - V N N - - - - - - - - - - - - - T A S Y E E C Y S D V H T - - - - - - - - - D D H G T L E K L Y E E Y L Q L L N
gm028311_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G52600.1     - - - - - - - - - - - - - - - - - - - - - - - -
gm055101_Glyma2    - - - - P Y F P Q D Q D M G F S S F - - - - - -
gm017550_Glyma0    - - - - - - - M D Q G Q F E R N S F A E S L L E
gm043627_Glyma1    - - - - - - - M D H G Q F E L N S F A E S L L D
gm055102_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - -
gm046082_Glyma1    - - - - - - - - - - R K L K I T C S - - - - - -
gm035597_Glyma1    S V L Q P W W L P N R T N K - - - - - - - - - -
gm053348_Glyma1    - - - - - - - V E E K P D E L D S F A Q S L L V
gm028311_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - -
 
0