fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52660.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020472 LLLMRNLSLNLTSPSF in 277/317 AT5G52660.1 1st_not 0.583497053 II
Pt016621 not found in 356aa AT5G52660.2 not_1st 0.520628683 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G52660.2     MVSRN---SDG-YFLDP----TGM-TVPG---LGPSFTAAV------SSSSSPTTSSTAV
pt020472_POPTR_ MVSKNPNPADG-SYLDP----TGMAALPG---LSPFPT----------TTTPPTTTTTS-
pt016621_POPTR_ MVSVNPNPALGFYFFDPMNNSSHM-ELPGVNFLPPTNTNTATDTCNDTVSAANTTTTTN-
                *** *   : *  ::**    : *  :**   * *  *           ::. **::*  

AT5G52660.2     AVADVTAMVSSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIG
pt020472_POPTR_ ---------SSTSEDPNKKIRKPYTITKSRESWSEPEHDKFLEALQLFDRDWKKIGAFIG
pt016621_POPTR_ ---NNNHKLVSFSEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVG
                          * .** .****************:* ******************* **:*

AT5G52660.2     SKTVIQIRSHAQKYFLKVQKSGTGEHLPPPRPKRKAAHPYPQKAHKN-VQLQVPG-SFKS
pt020472_POPTR_ SKTIIQIRSHAQKYFLKVQKSGTNEHLPPPRPKRKAAHPYPQKASKNAIVLSQPSEAFQS
pt016621_POPTR_ SKTVIQIRSHAQKYFLKVQKSGTSEHVPPPRPKRKAAHPYPQKAPKSAAVASQVTGSFQS
                ***:*******************.**:***************** *.    .    :*:*

AT5G52660.2     TSEPNDPSFMFRPESSSMLMTSPTTAA-AAPWT-NNAQTISFTPLPK-----AGAGANNN
pt020472_POPTR_ SSAPLEPGYVLRPDSSSIPMNPIASAAVASSWT-NNVPTVSLSNQTK------GPVAANN
pt016621_POPTR_ SSALLEPGYLYRPDSTSVLGNPITSGA-LSTWSFNSVPPVSMSQMTNDDAGLAGPTIANK
                :*   :*.:: **:*:*:  .. ::.*  :.*: *.. .:*::  .:      *.   *:

AT5G52660.2     CS--SSSENTPRPRSNRDARDHGNVGHSLRVLPDFAQVYGFIGSVFDPYASNHLQKLKKM
pt020472_POPTR_ CC--SSTESTPRTKPIGKTAEQGNHGHSMRVLPDFSQVYGFIGSVFDPNVTDQLQNLKKM
pt016621_POPTR_ CCYSSSNESASRTWQTGKIIDKRAQGKPERVMPDFAQVYSFIGNVFDPNGSDHLQRLKQM
                *.  **.*.:.*.    .  ::   *:. **:***:***.***.****  :::**.**:*

AT5G52660.2     DPIDVETVLLLMRNLSINLSSPDFEDHRRLLSSYDIGSETATDHGGVNKTLNKDP-----
pt020472_POPTR_ DPIDVETVLLLMRNLSLNLTSPSFEEHRTLLSSHEIDSETIGANNNADQSMNVA------
pt016621_POPTR_ DPINLETVLLLMRNLSINLTSPEFEDHRRLLASYDVDSEKVNE-GGAYRNTTVDRLGNPI
                ***::***********:**:**.**:** **:*:::.**.    ... :. .        

AT5G52660.2     PEIST
pt020472_POPTR_ -----
pt016621_POPTR_ PAI--
BoxShade v3.31 C (beta, 970507) Output
AT5G52660.2     M V S R N - - - S D G - Y F L D P - - - - T G M - T V P G - - - L G P S F T A A V - - - - - - S S S S S P T T S S T A V
pt020472_POPTR_    M V S K N P N P A D G - S Y L D P - - - - T G M A A L P G - - - L S P F P T - - - - - - - - - - T T T P P T T T T T S -
pt016621_POPTR_    M V S V N P N P A L G F Y F F D P M N N S S H M - E L P G V N F L P P T N T N T A T D T C N D T V S A A N T T T T T N -
 
AT5G52660.2     A V A D V T A M V S S S E E D L S K K I R K P Y T I T K S R E S W T E P E H D K F L E A L Q L F D R D W K K I E A F I G
pt020472_POPTR_    - - - - - - - - - S S T S E D P N K K I R K P Y T I T K S R E S W S E P E H D K F L E A L Q L F D R D W K K I G A F I G
pt016621_POPTR_    - - - N N N H K L V S F S E D P N K K I R K P Y T I T K S R E S W T E Q E H D K F L E A L Q L F D R D W K K I E A F V G
 
AT5G52660.2     S K T V I Q I R S H A Q K Y F L K V Q K S G T G E H L P P P R P K R K A A H P Y P Q K A H K N - V Q L Q V P G - S F K S
pt020472_POPTR_    S K T I I Q I R S H A Q K Y F L K V Q K S G T N E H L P P P R P K R K A A H P Y P Q K A S K N A I V L S Q P S E A F Q S
pt016621_POPTR_    S K T V I Q I R S H A Q K Y F L K V Q K S G T S E H V P P P R P K R K A A H P Y P Q K A P K S A A V A S Q V T G S F Q S
 
AT5G52660.2     T S E P N D P S F M F R P E S S S M L M T S P T T A A - A A P W T - N N A Q T I S F T P L P K - - - - - A G A G A N N N
pt020472_POPTR_    S S A P L E P G Y V L R P D S S S I P M N P I A S A A V A S S W T - N N V P T V S L S N Q T K - - - - - - G P V A A N N
pt016621_POPTR_    S S A L L E P G Y L Y R P D S T S V L G N P I T S G A - L S T W S F N S V P P V S M S Q M T N D D A G L A G P T I A N K
 
AT5G52660.2     C S - - S S S E N T P R P R S N R D A R D H G N V G H S L R V L P D F A Q V Y G F I G S V F D P Y A S N H L Q K L K K M
pt020472_POPTR_    C C - - S S T E S T P R T K P I G K T A E Q G N H G H S M R V L P D F S Q V Y G F I G S V F D P N V T D Q L Q N L K K M
pt016621_POPTR_    C C Y S S S N E S A S R T W Q T G K I I D K R A Q G K P E R V M P D F A Q V Y S F I G N V F D P N G S D H L Q R L K Q M
 
AT5G52660.2     D P I D V E T V L L L M R N L S I N L S S P D F E D H R R L L S S Y D I G S E T A T D H G G V N K T L N K D P - - - - -
pt020472_POPTR_    D P I D V E T V L L L M R N L S L N L T S P S F E E H R T L L S S H E I D S E T I G A N N N A D Q S M N V A - - - - - -
pt016621_POPTR_    D P I N L E T V L L L M R N L S I N L T S P E F E D H R R L L A S Y D V D S E K V N E - G G A Y R N T T V D R L G N P I
 
AT5G52660.2     P E I S T
pt020472_POPTR_    - - - - -
pt016621_POPTR_    P A I - -
 
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