fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52660.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027895 not found in 294aa AT5G52660.1 1st_not 0.471512770 II
Sb033225 SNAPNHLRLGLLDMLV in 376/488 AT5G52660.2 not_1st 0.444007858 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G52660.2     -----------------MVSRNSDGYFLDPTGMTVPG--------LGPSFTAAVSSSSSP
Sb033225_Sorbi1 GLRYATRKEEQEGSGRSMVSMSTTPHPLDPSVPAVAGGGKEEEEEAGRAREEAAAAAAAP
Sb027895_Sorbi1 ----------------------------DPSPLT---------------FLSMVSASAPP
                                            **:  :                   .::::.*

AT5G52660.2     TTSSTAVAVADVTAMVSSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWK
Sb033225_Sorbi1 AAVPVPTV-------GNDDDDDGPRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWK
Sb027895_Sorbi1 PPLQSDAA---------GSGEDASKKVRKPYTITKSRESWTEQEHDKFLEALQLFDRDWK
                ..    ..         .. :* .:::**************: *****************

AT5G52660.2     KIEAFIGSKTVIQIRSHAQKYFLKVQKSGTGEHLPPPRPKRKAAHPYPQKAHKNVQLQVP
Sb033225_Sorbi1 KIEAYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPRPKRKAAHPYPHKASKKA-LQV-
Sb027895_Sorbi1 KIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASK-------
                ****::*********************.**.**:**************:** *       

AT5G52660.2     GSFKSTSEPNDPSFMFRPESSSMLMTSPTTAAAAPWTNN------AQTISFTPLPKAGAG
Sb033225_Sorbi1 ------VLPQQASHIMEQGCGTPMDTA--TVATDSSANDAFP---VQHFS----PRHTQG
Sb027895_Sorbi1 ---------NEPNYGLKTDSSSIHRNSGMNVSVSSWAHSSIPQAVASTMVKEDLGAGTPG
                         ::... :.  ..:   .:  ..:. . ::.      .. :          *

AT5G52660.2     ANNNCSSSSENTPRPRSNRDARDHGNVGHSLRVLPDFAQVYGFIGSVFDPYASNHLQKLK
Sb033225_Sorbi1 ATYNNSSSIGSQSGTWPTSEGTEQDIRHPALSAMPDFARVYNFLGSIFDPETNGHLQQLK
Sb027895_Sorbi1 PNNFCSSSTEGPPRTWQPGETNDQINQVPSLRLMPDFAEVYSFLGSVFDPSTSGHLQKLK
                ..   ***  . . .    :  ::     :*  :****.**.*:**:*** :..***:**

AT5G52660.2     KMDPIDVETVLLLMRNLSINLSSPDFEDHRRLLSSYD------IGSETATDHGGVNKTLN
Sb033225_Sorbi1 EMDPIDAETVLLLMKNLSINLTSPNFEEHRRLLSSHASSMDQEMGSSHIH----------
Sb027895_Sorbi1 EMNPIDVETALLLMRNLSINLTSPDFEDQRKLLSSYSTSDGLQLGSSRSS-------ALA
                :*:***.**.****:******:**:**::*:****:       :**.             

AT5G52660.2     KDPPEIST--
Sb033225_Sorbi1 --LPFMITSK
Sb027895_Sorbi1 MSTPFM----
                   * :
BoxShade v3.31 C (beta, 970507) Output
AT5G52660.2     - - - - - - - - - - - - - - - - - M V S R N S D G Y F L D P T G M T V P G - - - - - - - - L G P S F T A A V S S S S S P
Sb033225_Sorbi1    G L R Y A T R K E E Q E G S G R S M V S M S T T P H P L D P S V P A V A G G G K E E E E E A G R A R E E A A A A A A A P
Sb027895_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - D P S P L T - - - - - - - - - - - - - - - F L S M V S A S A P P
 
AT5G52660.2     T T S S T A V A V A D V T A M V S S S E E D L S K K I R K P Y T I T K S R E S W T E P E H D K F L E A L Q L F D R D W K
Sb033225_Sorbi1    A A V P V P T V - - - - - - - G N D D D D D G P R R V R K P Y T I T K S R E S W T D P E H D K F L E A L Q L F D R D W K
Sb027895_Sorbi1    P P L Q S D A A - - - - - - - - - G S G E D A S K K V R K P Y T I T K S R E S W T E Q E H D K F L E A L Q L F D R D W K
 
AT5G52660.2     K I E A F I G S K T V I Q I R S H A Q K Y F L K V Q K S G T G E H L P P P R P K R K A A H P Y P Q K A H K N V Q L Q V P
Sb033225_Sorbi1    K I E A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R P K R K A A H P Y P H K A S K K A - L Q V -
Sb027895_Sorbi1    K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S E H V P P P R P K R K A A H P Y P Q K A S K - - - - - - -
 
AT5G52660.2     G S F K S T S E P N D P S F M F R P E S S S M L M T S P T T A A A A P W T N N - - - - - - A Q T I S F T P L P K A G A G
Sb033225_Sorbi1    - - - - - - V L P Q Q A S H I M E Q G C G T P M D T A - - T V A T D S S A N D A F P - - - V Q H F S - - - - P R H T Q G
Sb027895_Sorbi1    - - - - - - - - - N E P N Y G L K T D S S S I H R N S G M N V S V S S W A H S S I P Q A V A S T M V K E D L G A G T P G
 
AT5G52660.2     A N N N C S S S S E N T P R P R S N R D A R D H G N V G H S L R V L P D F A Q V Y G F I G S V F D P Y A S N H L Q K L K
Sb033225_Sorbi1    A T Y N N S S S I G S Q S G T W P T S E G T E Q D I R H P A L S A M P D F A R V Y N F L G S I F D P E T N G H L Q Q L K
Sb027895_Sorbi1    P N N F C S S S T E G P P R T W Q P G E T N D Q I N Q V P S L R L M P D F A E V Y S F L G S V F D P S T S G H L Q K L K
 
AT5G52660.2     K M D P I D V E T V L L L M R N L S I N L S S P D F E D H R R L L S S Y D - - - - - - I G S E T A T D H G G V N K T L N
Sb033225_Sorbi1    E M D P I D A E T V L L L M K N L S I N L T S P N F E E H R R L L S S H A S S M D Q E M G S S H I H - - - - - - - - - -
Sb027895_Sorbi1    E M N P I D V E T A L L L M R N L S I N L T S P D F E D Q R K L L S S Y S T S D G L Q L G S S R S S - - - - - - - A L A
 
AT5G52660.2     K D P P E I S T - -
Sb033225_Sorbi1    - - L P F M I T S K
Sb027895_Sorbi1    M S T P F M - - - -
 
0