fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52660.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm045071 not found in 301aa AT5G52660.1 1st_not 0.555992141 II
Gm054886 not found in 306aa AT5G52660.2 not_1st 0.544204322 II
Gm043731 not found in 332aa AT5G52660.2 not_1st 0.499017681 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G52660.2     MVSRN---SDGYF-LDPT-GMTVPG---LGPSFTAAVSSSSSPTTSSTAVAVADVTAMVS
gm045071_Glyma1 MVSKNPNPPEGFY-LDPSGGMPLPG---MPP-FASVSAATA------------------A
gm043731_Glyma1 MVSVNPNPAQGFYFFDPS-NMTLPGVNNLPPPPPPAPAA--------------------P
gm054886_Glyma2 MVSKNPNPSEAFY-LDPS-GMSLPG---ILP-FAAAATAT-------------------A
                *** *   .:.:: :**: .*.:**   : *  ... ::                    .

AT5G52660.2     SSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSH
gm045071_Glyma1 NSPEDAAKKIRKPYTITKSRENWTEPEHDKFLEAIQLFDRDWKKIEAFVGSKSVIQIRSH
gm043731_Glyma1 SAVEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSH
gm054886_Glyma2 DSFEDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSH
                .: **  ** ***********.*** ********:*************:***:*******

AT5G52660.2     AQKYFLKVQKSGTGEHLPPPRPKRKAAHPYPQKAHKNVQL--QVPGSFKSTSEPNDPSFM
gm045071_Glyma1 AQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPVLSQVSGRFQSSSALLEPGYI
gm043731_Glyma1 AQKYFLKVQKNGTSEHVPPPRPKRKAARPYPQKAPKTPTV-SQVMGPLQSSSAFIEPAYI
gm054886_Glyma2 AQKYFLKVQKSGTNEHLPPPRPKRKAAHPYPQKASKTAPVLSQVSGSFQSSSALLEPGYI
                **********.**.**:**********:****** *.  :  ** * ::*:*   :*.::

AT5G52660.2     FRPESSSMLMTSPTTAAAAPWTNNA-Q--TISF-TPLPKAG--------AG--ANNNCS-
gm045071_Glyma1 LKNDAPPMLKTPIMNTVASSWSNNTLQ--TANL-SPVTKV---------------NNPC-
gm043731_Glyma1 YSPDSSSVLGTPVTNMPLSSWNYNT----TPQP-GNVPQVTRDDMGLTGAGQAAPLNCCY
gm054886_Glyma2 LKHDSSAMPKTPIINTAVSSWSNNSLQKTTSVLHGQKQKV---------------NNCC-
                   ::..:  *.  .   :.*. *:    *        :.                * . 

AT5G52660.2     -SSSENTPRPRSNRDARDHGNVGHSLR--VLPDFAQVYGFIGSVFDPYASNHLQKLKKMD
gm045071_Glyma1 -SSGESTPKVWPVGESNCQGNKIHPLR--VLPDFTQVYGFIGSVFDPNATEHLQKLKKMD
gm043731_Glyma1 SSSNESTPPTWPRSKRINQGDQGKPIK--VMPDFAQVYSFIGSVFDPNSTNHLQKLQQMD
gm054886_Glyma2 -SSSRS-PRAQLVGESNGQRNNSHPLRGKVLPDFAEVYSFIGSVFDPNVTGHVQKLKRMD
                 **... *      .   : :  :.::  *:***::**.********  : *:***::**

AT5G52660.2     PIDVETVLLLMRNLSINLSSPDFEDHRRLLSSYDIGSETAT-------DHG-GVNKTLNK
gm045071_Glyma1 RIDVETVLLLMRNLSINLTSPDFEDHRKLLSSYEVEPERDD-------NYQRG-------
gm043731_Glyma1 PINVETVLLLMTNLSVNLMSPEFEDHKRLLSSYDTDSDKSKFVNICSKSFT-------NK
gm054886_Glyma2 PIDVETVLLLMRNLSINLASPDFEDHRRLLASYEVEPEVDKYK--CRLNHA---------
                 *:******** ***:** **:****::**:**:  .:          ..          

AT5G52660.2     DPPEIST-
gm045071_Glyma1 --------
gm043731_Glyma1 SESAVLSA
gm054886_Glyma2 --------
BoxShade v3.31 C (beta, 970507) Output
AT5G52660.2     M V S R N - - - S D G Y F - L D P T - G M T V P G - - - L G P S F T A A V S S S S S P T T S S T A V A V A D V T A M V S
gm045071_Glyma1    M V S K N P N P P E G F Y - L D P S G G M P L P G - - - M P P - F A S V S A A T A - - - - - - - - - - - - - - - - - - A
gm043731_Glyma1    M V S V N P N P A Q G F Y F F D P S - N M T L P G V N N L P P P P P P A P A A - - - - - - - - - - - - - - - - - - - - P
gm054886_Glyma2    M V S K N P N P S E A F Y - L D P S - G M S L P G - - - I L P - F A A A A T A T - - - - - - - - - - - - - - - - - - - A
 
AT5G52660.2     S S E E D L S K K I R K P Y T I T K S R E S W T E P E H D K F L E A L Q L F D R D W K K I E A F I G S K T V I Q I R S H
gm045071_Glyma1    N S P E D A A K K I R K P Y T I T K S R E N W T E P E H D K F L E A I Q L F D R D W K K I E A F V G S K S V I Q I R S H
gm043731_Glyma1    S A V E D P N K K I R K P Y T I T K S R E S W T E Q E H D K F L E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H
gm054886_Glyma2    D S F E D P A K K T R K P Y T I T K S R E S W T E P E H D K F L E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H
 
AT5G52660.2     A Q K Y F L K V Q K S G T G E H L P P P R P K R K A A H P Y P Q K A H K N V Q L - - Q V P G S F K S T S E P N D P S F M
gm045071_Glyma1    A Q K Y F L K V Q K S G T S E H L P P P R P K R K A A H P Y P Q K A S K N A P V L S Q V S G R F Q S S S A L L E P G Y I
gm043731_Glyma1    A Q K Y F L K V Q K N G T S E H V P P P R P K R K A A R P Y P Q K A P K T P T V - S Q V M G P L Q S S S A F I E P A Y I
gm054886_Glyma2    A Q K Y F L K V Q K S G T N E H L P P P R P K R K A A H P Y P Q K A S K T A P V L S Q V S G S F Q S S S A L L E P G Y I
 
AT5G52660.2     F R P E S S S M L M T S P T T A A A A P W T N N A - Q - - T I S F - T P L P K A G - - - - - - - - A G - - A N N N C S -
gm045071_Glyma1    L K N D A P P M L K T P I M N T V A S S W S N N T L Q - - T A N L - S P V T K V - - - - - - - - - - - - - - - N N P C -
gm043731_Glyma1    Y S P D S S S V L G T P V T N M P L S S W N Y N T - - - - T P Q P - G N V P Q V T R D D M G L T G A G Q A A P L N C C Y
gm054886_Glyma2    L K H D S S A M P K T P I I N T A V S S W S N N S L Q K T T S V L H G Q K Q K V - - - - - - - - - - - - - - - N N C C -
 
AT5G52660.2     - S S S E N T P R P R S N R D A R D H G N V G H S L R - - V L P D F A Q V Y G F I G S V F D P Y A S N H L Q K L K K M D
gm045071_Glyma1    - S S G E S T P K V W P V G E S N C Q G N K I H P L R - - V L P D F T Q V Y G F I G S V F D P N A T E H L Q K L K K M D
gm043731_Glyma1    S S S N E S T P P T W P R S K R I N Q G D Q G K P I K - - V M P D F A Q V Y S F I G S V F D P N S T N H L Q K L Q Q M D
gm054886_Glyma2    - S S S R S - P R A Q L V G E S N G Q R N N S H P L R G K V L P D F A E V Y S F I G S V F D P N V T G H V Q K L K R M D
 
AT5G52660.2     P I D V E T V L L L M R N L S I N L S S P D F E D H R R L L S S Y D I G S E T A T - - - - - - - D H G - G V N K T L N K
gm045071_Glyma1    R I D V E T V L L L M R N L S I N L T S P D F E D H R K L L S S Y E V E P E R D D - - - - - - - N Y Q R G - - - - - - -
gm043731_Glyma1    P I N V E T V L L L M T N L S V N L M S P E F E D H K R L L S S Y D T D S D K S K F V N I C S K S F T - - - - - - - N K
gm054886_Glyma2    P I D V E T V L L L M R N L S I N L A S P D F E D H R R L L A S Y E V E P E V D K Y K - - C R L N H A - - - - - - - - -
 
AT5G52660.2     D P P E I S T -
gm045071_Glyma1    - - - - - - - -
gm043731_Glyma1    S E S A V L S A
gm054886_Glyma2    - - - - - - - -
 
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