fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G52830.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb010058 not found in 375aa AT5G52830.1 1st_1st 0.372197309 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G52830.1     MSSE----DWDLFAVVR-SCSSSVSTTNSCAGHEDDIGNCKQQQDPPPPPLFQASSSCNE
Sb010058_Sorbi1 MEEERCFNNWDLDAVVRLGCRRRLSP----PGQPDPFASFL----PPPPP----------
                *..*    :*** **** .*   :*.    .*: * :..      *****          

AT5G52830.1     LQDSCKPFLPVTTTTTTTWSPP----PLLPPPKASSPSP------------------NIL
Sb010058_Sorbi1 -------------------SPPHKEKPVVPAPAAKEPEPYAAWRFPDLGAAGGGQDGDEL
                                   ***    *::*.* *..*.*                  : *

AT5G52830.1     LKQEQVLLESQDQKPPLSVRV---FPPSTSSSVFVFRGQRDQLLQQQSQP-------PL-
Sb010058_Sorbi1 LR---ALLAAPPPPPPQPLPTPTPLPPPPP--------------QQQRQPAVAAVDVPLP
                *:   .** :    ** .: .   :**...              *** **       ** 

AT5G52830.1     ---------------------RSRKRKNQQKRTICHVTQENLSSDLWAWRKYGQKPIKGS
Sb010058_Sorbi1 QARPAPARAQPSGRQVPGGVPRSKRRKNQVKKVVCHVPADGSSSDVWAWRKYGQKPIKGS
                                     **::**** *:.:***. :. ***:**************

AT5G52830.1     PYPRNYYRCSSSKGCLARKQVERSNLDPNIFIVTYTGEHTHPRPTHRNSLAGSTRNK---
Sb010058_Sorbi1 PYPRGYYRCSSSKGCAARKQVERSRADPNTFILTYTGEHNHAAPTHRNSLAGTTRHKFPA
                ****.********** ********. *** **:******.*. *********:**:*   

AT5G52830.1     -SQPVNPVP-----------------------KPDTSPLSDTVKEEIHLSPTTPLKGNDD
Sb010058_Sorbi1 SATPQPPPPSVVVGGAGAGAGAAPGDAQHQHQQPSPSPTSTSTA---GLSPTTPLR----
                 : *  * *                       :*..** * :.     *******:    

AT5G52830.1     VQETNGDEDMVGQEVNMEEEEEEEEVEEDDEEEEDDDDVDDLLIPNLAVRDRDDLFF---
Sb010058_Sorbi1 ----------------------TPSMEEDDEEEE-----DELLVEDMEMAGEDELLFLNP
                                        .:********     *:**: :: : ..*:*:*   

AT5G52830.1     ---AGSFPS--------------W----------SAGSAGDGGG
Sb010058_Sorbi1 DADAGAPMSSLFDVVDEPFLSSPWVTATSSAGEPATGAAGAGS-
                   **:  *              *          ::*:** *.
BoxShade v3.31 C (beta, 970507) Output
AT5G52830.1     M S S E - - - - D W D L F A V V R - S C S S S V S T T N S C A G H E D D I G N C K Q Q Q D P P P P P L F Q A S S S C N E
Sb010058_Sorbi1    M E E E R C F N N W D L D A V V R L G C R R R L S P - - - - P G Q P D P F A S F L - - - - P P P P P - - - - - - - - - -
 
AT5G52830.1     L Q D S C K P F L P V T T T T T T T W S P P - - - - P L L P P P K A S S P S P - - - - - - - - - - - - - - - - - - N I L
Sb010058_Sorbi1    - - - - - - - - - - - - - - - - - - - S P P H K E K P V V P A P A A K E P E P Y A A W R F P D L G A A G G G Q D G D E L
 
AT5G52830.1     L K Q E Q V L L E S Q D Q K P P L S V R V - - - F P P S T S S S V F V F R G Q R D Q L L Q Q Q S Q P - - - - - - - P L -
Sb010058_Sorbi1    L R - - - A L L A A P P P P P P Q P L P T P T P L P P P P P - - - - - - - - - - - - - - Q Q Q R Q P A V A A V D V P L P
 
AT5G52830.1     - - - - - - - - - - - - - - - - - - - - - R S R K R K N Q Q K R T I C H V T Q E N L S S D L W A W R K Y G Q K P I K G S
Sb010058_Sorbi1    Q A R P A P A R A Q P S G R Q V P G G V P R S K R R K N Q V K K V V C H V P A D G S S S D V W A W R K Y G Q K P I K G S
 
AT5G52830.1     P Y P R N Y Y R C S S S K G C L A R K Q V E R S N L D P N I F I V T Y T G E H T H P R P T H R N S L A G S T R N K - - -
Sb010058_Sorbi1    P Y P R G Y Y R C S S S K G C A A R K Q V E R S R A D P N T F I L T Y T G E H N H A A P T H R N S L A G T T R H K F P A
 
AT5G52830.1     - S Q P V N P V P - - - - - - - - - - - - - - - - - - - - - - - K P D T S P L S D T V K E E I H L S P T T P L K G N D D
Sb010058_Sorbi1    S A T P Q P P P P S V V V G G A G A G A G A A P G D A Q H Q H Q Q P S P S P T S T S T A - - - G L S P T T P L R - - - -
 
AT5G52830.1     V Q E T N G D E D M V G Q E V N M E E E E E E E E V E E D D E E E E D D D D V D D L L I P N L A V R D R D D L F F - - -
Sb010058_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - T P S M E E D D E E E E - - - - - D E L L V E D M E M A G E D E L L F L N P
 
AT5G52830.1     - - - A G S F P S - - - - - - - - - - - - - - W - - - - - - - - - - S A G S A G D G G G
Sb010058_Sorbi1    D A D A G A P M S S L F D V V D E P F L S S P W V T A T S S A G E P A T G A A G A G S -
 
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