Input
| Putative repression domain
|
|
AT5G53200.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt026754 |
not found in 95aa |
AT5G53200.1 |
not_1st |
0.580357142 |
II |
Pt039931 |
not found in 92aa |
AT5G53200.1 |
not_1st |
0.5625 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT5G53200.1 MDNTDRRRRRKQHKIALHDS-EEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRV
pt026754_POPTR_ MESMNRRRRRKQPKINSSES-EEVSSIEWEFINMSEQEEDLIYRMHRLVGERWDLIAGRI
pt039931_POPTR_ MD----RRRRKQAKTTTHCSDQEVSSIEWEFINMSEQEEDLIYRMYKLVGDRWALIAGRI
*: ****** * * :************:*******:**::***:** *****:
AT5G53200.1 PGRQPEEIERYWIMRNSEGFADKRRQLHSSSHKHTKPHRPRFSIYPS
pt026754_POPTR_ PGRKAEEIERFWIMKHREGFAENGK-LYNEVKSRTSS----------
pt039931_POPTR_ PGRKAEEIERYWIMRHCEGFASRRKEQKRDVIPNTS-----------
***:.*****:***:: ****.. : . .*.
BoxShade v3.31 C (beta, 970507) Output
AT5G53200.1 |
M |
D |
N |
T |
D |
R |
R |
R |
R |
R |
K |
Q |
H |
K |
I |
A |
L |
H |
D |
S |
- |
E |
E |
V |
S |
S |
I |
E |
W |
E |
F |
I |
N |
M |
T |
E |
Q |
E |
E |
D |
L |
I |
F |
R |
M |
Y |
R |
L |
V |
G |
D |
R |
W |
D |
L |
I |
A |
G |
R |
V |
pt026754_POPTR_ |
M |
E |
S |
M |
N |
R |
R |
R |
R |
R |
K |
Q |
P |
K |
I |
N |
S |
S |
E |
S |
- |
E |
E |
V |
S |
S |
I |
E |
W |
E |
F |
I |
N |
M |
S |
E |
Q |
E |
E |
D |
L |
I |
Y |
R |
M |
H |
R |
L |
V |
G |
E |
R |
W |
D |
L |
I |
A |
G |
R |
I |
pt039931_POPTR_ |
M |
D |
- |
- |
- |
- |
R |
R |
R |
R |
K |
Q |
A |
K |
T |
T |
T |
H |
C |
S |
D |
Q |
E |
V |
S |
S |
I |
E |
W |
E |
F |
I |
N |
M |
S |
E |
Q |
E |
E |
D |
L |
I |
Y |
R |
M |
Y |
K |
L |
V |
G |
D |
R |
W |
A |
L |
I |
A |
G |
R |
I |
|
AT5G53200.1 |
P |
G |
R |
Q |
P |
E |
E |
I |
E |
R |
Y |
W |
I |
M |
R |
N |
S |
E |
G |
F |
A |
D |
K |
R |
R |
Q |
L |
H |
S |
S |
S |
H |
K |
H |
T |
K |
P |
H |
R |
P |
R |
F |
S |
I |
Y |
P |
S |
pt026754_POPTR_ |
P |
G |
R |
K |
A |
E |
E |
I |
E |
R |
F |
W |
I |
M |
K |
H |
R |
E |
G |
F |
A |
E |
N |
G |
K |
- |
L |
Y |
N |
E |
V |
K |
S |
R |
T |
S |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt039931_POPTR_ |
P |
G |
R |
K |
A |
E |
E |
I |
E |
R |
Y |
W |
I |
M |
R |
H |
C |
E |
G |
F |
A |
S |
R |
R |
K |
E |
Q |
K |
R |
D |
V |
I |
P |
N |
T |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
|