Input
| Putative repression domain
|
|
AT5G53200.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt016529 |
not found in 88aa |
AT2G46410.1 |
not_not |
0.53125 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G53200.1 MDNTDRRRRRKQHKIALHDSEEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVP
pt016529_POPTR_ ---MDRRRKKQAKTTSCCSEQEVSSIEWEFINMSEQEEDLIYRMHNLVGDRWALIAGRIP
****::: :. : ..:************:*******:**:.****** *****:*
AT5G53200.1 GRQPEEIERYWIMRNSEGFADKRRQ---LHSSSHKHTKPHRPRFSIYPS
pt016529_POPTR_ GRKAEEIERFWLMRHGEGFASRRREQKRCHS------------------
**:.*****:*:**:.****.:**: **
BoxShade v3.31 C (beta, 970507) Output
AT5G53200.1 |
M |
D |
N |
T |
D |
R |
R |
R |
R |
R |
K |
Q |
H |
K |
I |
A |
L |
H |
D |
S |
E |
E |
V |
S |
S |
I |
E |
W |
E |
F |
I |
N |
M |
T |
E |
Q |
E |
E |
D |
L |
I |
F |
R |
M |
Y |
R |
L |
V |
G |
D |
R |
W |
D |
L |
I |
A |
G |
R |
V |
P |
pt016529_POPTR_ |
- |
- |
- |
M |
D |
R |
R |
R |
K |
K |
Q |
A |
K |
T |
T |
S |
C |
C |
S |
E |
Q |
E |
V |
S |
S |
I |
E |
W |
E |
F |
I |
N |
M |
S |
E |
Q |
E |
E |
D |
L |
I |
Y |
R |
M |
H |
N |
L |
V |
G |
D |
R |
W |
A |
L |
I |
A |
G |
R |
I |
P |
|
AT5G53200.1 |
G |
R |
Q |
P |
E |
E |
I |
E |
R |
Y |
W |
I |
M |
R |
N |
S |
E |
G |
F |
A |
D |
K |
R |
R |
Q |
- |
- |
- |
L |
H |
S |
S |
S |
H |
K |
H |
T |
K |
P |
H |
R |
P |
R |
F |
S |
I |
Y |
P |
S |
pt016529_POPTR_ |
G |
R |
K |
A |
E |
E |
I |
E |
R |
F |
W |
L |
M |
R |
H |
G |
E |
G |
F |
A |
S |
R |
R |
R |
E |
Q |
K |
R |
C |
H |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
|