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| Input | Putative repression domain | ||||
|---|---|---|---|---|---|
| AT5G53200.1 | not found | ||||
| Ortholog | Putative repression domain | Reverse top hit | Relation | Blast score ratio | Type |
| Gm029528 | not found in 79aa | AT5G53200.1 | 1st_1st | 0.424107142 | Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G53200.1 MDNTDRRRRRKQHKIALHDSEEVSSIEWEFINMTEQEEDLIFRMYRLVGDRWDLIAGRVP
gm029528_Glyma1 MSTTAT------------TTSEVSSNEWKVIHMSEQEEDLIRRMYKLVGDKWNLIAGRIP
*..* :.**** **:.*:*:******* ***:****:*:*****:*
AT5G53200.1 GRQPEEIERYWIMRNSEGFADKRRQLHSSSHKHTKPHRPRFSIYPS
gm029528_Glyma1 SRKAEEIERFWIMRHGDAFSVKR---HRSKAQDS------------
.*:.*****:****:.:.*: ** * *. :.:
| AT5G53200.1 | M | D | N | T | D | R | R | R | R | R | K | Q | H | K | I | A | L | H | D | S | E | E | V | S | S | I | E | W | E | F | I | N | M | T | E | Q | E | E | D | L | I | F | R | M | Y | R | L | V | G | D | R | W | D | L | I | A | G | R | V | P |
| gm029528_Glyma1 | M | S | T | T | A | T | - | - | - | - | - | - | - | - | - | - | - | - | T | T | S | E | V | S | S | N | E | W | K | V | I | H | M | S | E | Q | E | E | D | L | I | R | R | M | Y | K | L | V | G | D | K | W | N | L | I | A | G | R | I | P |
| AT5G53200.1 | G | R | Q | P | E | E | I | E | R | Y | W | I | M | R | N | S | E | G | F | A | D | K | R | R | Q | L | H | S | S | S | H | K | H | T | K | P | H | R | P | R | F | S | I | Y | P | S | ||||||||||||||
| gm029528_Glyma1 | S | R | K | A | E | E | I | E | R | F | W | I | M | R | H | G | D | A | F | S | V | K | R | - | - | - | H | R | S | K | A | Q | D | S | - | - | - | - | - | - | - | - | - | - | - | - | ||||||||||||||