fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G53210.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014979 not found in 218aa AT5G53210.1 not_1st 0.423340961 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G53210.1     MQEIIPDFLEECEFVDTSLAGDDLFAILESLEGAGEISPTAASTPKDGTTSSKELVKDQD
gm014979_Glyma0 ------------------------------------------------------------
                                                                            

AT5G53210.1     YENSSPKRKKQRLETRKEEDEEEEDGDGEAEEDNKQDGQQKMSHVTVERNRRKQMNEHLT
gm014979_Glyma0 -----------------------------------------MSHITVERNRRKQMNEHLT
                                                         ***:***************

AT5G53210.1     VLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVVPSPRP
gm014979_Glyma0 VLRSLMPCFYVKRGDQASIIGGVVDYISELQQVLQALEAKKQRKVYCEVLSPRLVSSPRP
                ************************:**********:********.*.******:*.****

AT5G53210.1     SPPVLSPRKPPLSPRINHHQIHHHLLLPPISPRTPQPTSPYRAIPPQLPLIPQPPLRSYS
gm014979_Glyma0 SP--LSPRKPPLSPRLNL----------PISPRTPQPGSPYR---PRL----HQQQHGYN
                **  ***********:*           ********* ****   *:*    :   :.*.

AT5G53210.1     SLASCSSLGDPPPYSPASSSSSPSVSSNHESSV---INELVANSKSALADVEVKFSGANV
gm014979_Glyma0 NIIS-------PTISNVSLDPSPTSSAN--SSINDNINELVANSKSPTADVEVKFSGPHV
                .: *       *. * .* ..**: *:*  **:   **********. *********.:*

AT5G53210.1     LLKTVSHKIPGQVMKIIAALEDLALEILQVNIN-TVDETMLNSFTIKIGIECQLSAEELA
gm014979_Glyma0 LLKTVSQRIPGQALKIITALEDLALEIVHVNINCAADDTMLNSFTIK-------------
                ******::****.:***:*********::**** :.*:*********             

AT5G53210.1     QQIQQTFC
gm014979_Glyma0 --------
BoxShade v3.31 C (beta, 970507) Output
AT5G53210.1     M Q E I I P D F L E E C E F V D T S L A G D D L F A I L E S L E G A G E I S P T A A S T P K D G T T S S K E L V K D Q D
gm014979_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G53210.1     Y E N S S P K R K K Q R L E T R K E E D E E E E D G D G E A E E D N K Q D G Q Q K M S H V T V E R N R R K Q M N E H L T
gm014979_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S H I T V E R N R R K Q M N E H L T
 
AT5G53210.1     V L R S L M P C F Y V K R G D Q A S I I G G V V E Y I S E L Q Q V L Q S L E A K K Q R K T Y A E V L S P R V V P S P R P
gm014979_Glyma0    V L R S L M P C F Y V K R G D Q A S I I G G V V D Y I S E L Q Q V L Q A L E A K K Q R K V Y C E V L S P R L V S S P R P
 
AT5G53210.1     S P P V L S P R K P P L S P R I N H H Q I H H H L L L P P I S P R T P Q P T S P Y R A I P P Q L P L I P Q P P L R S Y S
gm014979_Glyma0    S P - - L S P R K P P L S P R L N L - - - - - - - - - - P I S P R T P Q P G S P Y R - - - P R L - - - - H Q Q Q H G Y N
 
AT5G53210.1     S L A S C S S L G D P P P Y S P A S S S S S P S V S S N H E S S V - - - I N E L V A N S K S A L A D V E V K F S G A N V
gm014979_Glyma0    N I I S - - - - - - - P T I S N V S L D P S P T S S A N - - S S I N D N I N E L V A N S K S P T A D V E V K F S G P H V
 
AT5G53210.1     L L K T V S H K I P G Q V M K I I A A L E D L A L E I L Q V N I N - T V D E T M L N S F T I K I G I E C Q L S A E E L A
gm014979_Glyma0    L L K T V S Q R I P G Q A L K I I T A L E D L A L E I V H V N I N C A A D D T M L N S F T I K - - - - - - - - - - - - -
 
AT5G53210.1     Q Q I Q Q T F C
gm014979_Glyma0    - - - - - - - -
 
0