fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G53210.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035278 not found in 283aa AT3G24140.1 not_not 0.457665903 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G53210.1     MQEIIPDFLEECEFVDTSLAGDDLFAILESLEGAGEISPTAASTPKDGTTSSKELVKDQD
gm035278_Glyma1 MDESLCDIFKDTEFGDTHFGGGDLFSILESIDDLKDFPPTNNNEAVIGRTS-------KE
                *:* : *:::: ** ** :.*.***:****::.  ::.**  . .  * **       ::

AT5G53210.1     YENSSPKRKKQRLETRKEEDEEEEDGDGEAEEDNKQDGQQKMSHVTVERNRRKQMNEHLT
gm035278_Glyma1 NEQNSRMVKRQKLRSTSPEE------------------LQKVSHITVERNRRKQMNENLL
                 *:.*   *:*:*.: . *:                   **:**:************:* 

AT5G53210.1     VLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVVPSPRP
gm035278_Glyma1 VLRSLMPSFYVKRGDQASIIGGVVDYINEMQQLLQCLEAKKQRKVYIEVLSPRLVSSPRP
                *******.****************:**.*:**:**.********.* ******:*.****

AT5G53210.1     SPPVLSPRKPPLSPRINHHQIHHHLLLPPISPRTP-QPTSPYRAIPPQLPLIPQPPLRSY
gm035278_Glyma1 SP--LSPRKPPLSPRISL----------PISPRTPQQPSSPYK---PRL----QPGYLS-
                **  ************.           ******* **:***:   *:*    **   * 

AT5G53210.1     SSLASCSSLGDPPPYSPASSSSSPSVSSNHESSVINELVANSKSALADVEVKFSGANVLL
gm035278_Glyma1 PTIAN----------SPTSSASS-SINDN-----INELVANSKSIIADVEVKFSGPHVLL
                .::*.          **:**:** *:..*     ********** :*********.:***

AT5G53210.1     KTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSFTIKIGIECQLSAEELAQQI
gm035278_Glyma1 KTVSPPIPGQAMRIISALEDLALEILHVNISTADETMLNSFTIK----------------
                ****  ****.*:**:**********:***.*.***********                

AT5G53210.1     QQTFC
gm035278_Glyma1 -----
BoxShade v3.31 C (beta, 970507) Output
AT5G53210.1     M Q E I I P D F L E E C E F V D T S L A G D D L F A I L E S L E G A G E I S P T A A S T P K D G T T S S K E L V K D Q D
gm035278_Glyma1    M D E S L C D I F K D T E F G D T H F G G G D L F S I L E S I D D L K D F P P T N N N E A V I G R T S - - - - - - - K E
 
AT5G53210.1     Y E N S S P K R K K Q R L E T R K E E D E E E E D G D G E A E E D N K Q D G Q Q K M S H V T V E R N R R K Q M N E H L T
gm035278_Glyma1    N E Q N S R M V K R Q K L R S T S P E E - - - - - - - - - - - - - - - - - - L Q K V S H I T V E R N R R K Q M N E N L L
 
AT5G53210.1     V L R S L M P C F Y V K R G D Q A S I I G G V V E Y I S E L Q Q V L Q S L E A K K Q R K T Y A E V L S P R V V P S P R P
gm035278_Glyma1    V L R S L M P S F Y V K R G D Q A S I I G G V V D Y I N E M Q Q L L Q C L E A K K Q R K V Y I E V L S P R L V S S P R P
 
AT5G53210.1     S P P V L S P R K P P L S P R I N H H Q I H H H L L L P P I S P R T P - Q P T S P Y R A I P P Q L P L I P Q P P L R S Y
gm035278_Glyma1    S P - - L S P R K P P L S P R I S L - - - - - - - - - - P I S P R T P Q Q P S S P Y K - - - P R L - - - - Q P G Y L S -
 
AT5G53210.1     S S L A S C S S L G D P P P Y S P A S S S S S P S V S S N H E S S V I N E L V A N S K S A L A D V E V K F S G A N V L L
gm035278_Glyma1    P T I A N - - - - - - - - - - S P T S S A S S - S I N D N - - - - - I N E L V A N S K S I I A D V E V K F S G P H V L L
 
AT5G53210.1     K T V S H K I P G Q V M K I I A A L E D L A L E I L Q V N I N T V D E T M L N S F T I K I G I E C Q L S A E E L A Q Q I
gm035278_Glyma1    K T V S P P I P G Q A M R I I S A L E D L A L E I L H V N I S T A D E T M L N S F T I K - - - - - - - - - - - - - - - -
 
AT5G53210.1     Q Q T F C
gm035278_Glyma1    - - - - -
 
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