fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G53290.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb007085 not found in 363aa AT5G53290.1 1st_1st 0.195895522 Ib
Gm014975 not found in 300aa AT5G53290.1 1st_1st 0.281716417 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G53290.1     ----MDEYIDFRPLKYTEHKTSMTKY--------TKKSSEKLSGGKSLKKVSICYTDPDA
gm014975_Glyma0 ----MEDSI---LCKHTVHHTVTKKLI-------SPKKSSQTNSTTERRIVRISYTDPDA
Sb007085_Sorbi1 VMWPMEEEM-FVAVRRTEHVEVTSRAVEVAPAAAKGREAAAGSAVPGPRTVRVFCDDYDA
                    *:: :     : * *    .:         . :.:   ..    : * :   * **

AT5G53290.1     TDSSSDEDEEDFLFPRRRVKRFVNEITVEPSCNNVVTGVSMKDRKRLSSSSDETQSPASS
gm014975_Glyma0 TDSSS--DEEGFPFVRQRMKRYVNQIEIETAAAEKVV------RKR----------PAGE
Sb007085_Sorbi1 TDSSSDEAEED-AVARRRVKRYVQEIRLERAVKEEAP------AGRAGASSAAAM-AGAA
                *****   **.  . *:*:**:*::* :* :  : .         *          ... 

AT5G53290.1     RQRPNNKVSVSGQIKK---------FRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEE
gm014975_Glyma0 ACRRPAKLH-SG--KK---------FRGVRQRPWGKWAAEIRDPARRVRLWLGTYDTAEE
Sb007085_Sorbi1 GERTTTRLVLPGRKRKSDGAAAEPRFRGVRRRPWGKYAAEIRDPWRRVRVWLGTFDTAEE
                  *   ::  .*  :*         *****:*****:******* :* *:****::****

AT5G53290.1     AAVVYDNAAIRLRGPDALTNFS------IP-PQEEEEEEEPEPVIEEKPV------IMTT
gm014975_Glyma0 AAMVYDNAAIRLRGPDALTNFV------TP-PKRDSPSPSPPPAAAETPAEVCEMKVVVT
Sb007085_Sorbi1 AAKVYDSAAIQLRGADATTNFEQVDDAPVPVPDEVAERLPQPPATASAPAPA----ASKN
                ** ***.***:***.** ***        * *..        *.  . *.         .

AT5G53290.1     PTPTTSSSESTEEDLQH-LSSPTSVLNHR-------SEEIQQVQQPFKSAKPEPGVSNAP
gm014975_Glyma0 EEASGSGYDSSEDHCHHNLSSPTSVLQFRSNSSEENSESQQKAEQVLRECEGE--TETSL
Sb007085_Sorbi1 ASSSATSYDSGEESHAA-AASPTSVLRSFPPSAVA-DDTCTKAAAKKPTTSPAPAIPAAS
                  .: :. :* *:      :******.         .:   :.       .       : 

AT5G53290.1     WWHTGFNTGLG-ESDDSFPLDTPFLDNYFNESPPEMSI-----FDQPMDQIFCENDDIFN
gm014975_Glyma0 FEETGEFLAL-----DNMPL--PAWDDVFNFETPEAC---------PSPSSLCQVDDFFQ
Sb007085_Sorbi1 APETDESTGGGTSSVFGCPF--SSADDCFGGEFPPLYTDFDLLADFPEPSL-----DFLA
                  .*.   .       . *:  .  *: *. . *            *  .      *:: 

AT5G53290.1     DMLFLGGETMNIEDELTSSSIKDMGSTFSDFDDSLISDLLVA
gm014975_Glyma0 DILF-------------------------------ASDPL--
Sb007085_Sorbi1 DIPE---EPLSLAPSIPAGSPEEW-----------PSDA---
                *:                                  **
BoxShade v3.31 C (beta, 970507) Output
AT5G53290.1     - - - - M D E Y I D F R P L K Y T E H K T S M T K Y - - - - - - - - T K K S S E K L S G G K S L K K V S I C Y T D P D A
gm014975_Glyma0    - - - - M E D S I - - - L C K H T V H H T V T K K L I - - - - - - - S P K K S S Q T N S T T E R R I V R I S Y T D P D A
Sb007085_Sorbi1    V M W P M E E E M - F V A V R R T E H V E V T S R A V E V A P A A A K G R E A A A G S A V P G P R T V R V F C D D Y D A
 
AT5G53290.1     T D S S S D E D E E D F L F P R R R V K R F V N E I T V E P S C N N V V T G V S M K D R K R L S S S S D E T Q S P A S S
gm014975_Glyma0    T D S S S - - D E E G F P F V R Q R M K R Y V N Q I E I E T A A A E K V V - - - - - - R K R - - - - - - - - - - P A G E
Sb007085_Sorbi1    T D S S S D E A E E D - A V A R R R V K R Y V Q E I R L E R A V K E E A P - - - - - - A G R A G A S S A A A M - A G A A
 
AT5G53290.1     R Q R P N N K V S V S G Q I K K - - - - - - - - - F R G V R Q R P W G K W A A E I R D P E Q R R R I W L G T F E T A E E
gm014975_Glyma0    A C R R P A K L H - S G - - K K - - - - - - - - - F R G V R Q R P W G K W A A E I R D P A R R V R L W L G T Y D T A E E
Sb007085_Sorbi1    G E R T T T R L V L P G R K R K S D G A A A E P R F R G V R R R P W G K Y A A E I R D P W R R V R V W L G T F D T A E E
 
AT5G53290.1     A A V V Y D N A A I R L R G P D A L T N F S - - - - - - I P - P Q E E E E E E E P E P V I E E K P V - - - - - - I M T T
gm014975_Glyma0    A A M V Y D N A A I R L R G P D A L T N F V - - - - - - T P - P K R D S P S P S P P P A A A E T P A E V C E M K V V V T
Sb007085_Sorbi1    A A K V Y D S A A I Q L R G A D A T T N F E Q V D D A P V P V P D E V A E R L P Q P P A T A S A P A P A - - - - A S K N
 
AT5G53290.1     P T P T T S S S E S T E E D L Q H - L S S P T S V L N H R - - - - - - - S E E I Q Q V Q Q P F K S A K P E P G V S N A P
gm014975_Glyma0    E E A S G S G Y D S S E D H C H H N L S S P T S V L Q F R S N S S E E N S E S Q Q K A E Q V L R E C E G E - - T E T S L
Sb007085_Sorbi1    A S S S A T S Y D S G E E S H A A - A A S P T S V L R S F P P S A V A - D D T C T K A A A K K P T T S P A P A I P A A S
 
AT5G53290.1     W W H T G F N T G L G - E S D D S F P L D T P F L D N Y F N E S P P E M S I - - - - - F D Q P M D Q I F C E N D D I F N
gm014975_Glyma0    F E E T G E F L A L - - - - - D N M P L - - P A W D D V F N F E T P E A C - - - - - - - - - P S P S S L C Q V D D F F Q
Sb007085_Sorbi1    A P E T D E S T G G G T S S V F G C P F - - S S A D D C F G G E F P P L Y T D F D L L A D F P E P S L - - - - - D F L A
 
AT5G53290.1     D M L F L G G E T M N I E D E L T S S S I K D M G S T F S D F D D S L I S D L L V A
gm014975_Glyma0    D I L F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A S D P L - -
Sb007085_Sorbi1    D I P E - - - E P L S L A P S I P A G S P E E W - - - - - - - - - - - P S D A - - -
 
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