fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G53950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm021681 not found in 163aa AT5G53950.1 1st_1st 0.378125 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G53950.1     MDIPYYHYDHGGDSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPW
Sm021681_Selmo1 -------MQQRPEDPYLPPGFRFHPTDEELV-YYLTRKVLFSSFRISAIAEVDLNKCEPW
                        ::  :. ***************: :** **** ..*   *************

AT5G53950.1     QLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKK
Sm021681_Selmo1 DLPTKASMGEKEWYFYTLRDRKYPTGMRTNRATEAGYWKATGKDRNINSSRTSCLVGMKK
                :** :*.********::*********:******************:* **:*..******

AT5G53950.1     TLVFYKGRAPKGEKSNWVMHEYRLEGKFS-YHFISRSSKD-EWVISRVFQKTTLASTGAV
Sm021681_Selmo1 TLVFYRGRAPKGLKSNWIMHEYRLEGEASQFNRNARLPKDSEWVICRVFQK---------
                *****:****** ****:********: * ::  :* .** ****.*****         

AT5G53950.1     SEGGGGGGATVSVSSGTGPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDS
Sm021681_Selmo1 ------------------------------------------------------------
                                                                            

AT5G53950.1     SCSYDSRSTNTTVTASAITEHVSCFSTVPTTTTALGLDVNSFSRLPPPLGFDFDPFPRFV
Sm021681_Selmo1 ------------------------------------------------------------
                                                                            

AT5G53950.1     SRNVSTQSNFRSFQENFNQFPYFGSSSASTMTSAVNLPSFQGGGGVSGMNYWLPATAEEN
Sm021681_Selmo1 ------------------------------------------------------------
                                                                            

AT5G53950.1     ESKVGVLHAGLDCIWNY
Sm021681_Selmo1 -----------------
BoxShade v3.31 C (beta, 970507) Output
AT5G53950.1     M D I P Y Y H Y D H G G D S Q Y L P P G F R F H P T D E E L I T H Y L L R K V L D G C F S S R A I A E V D L N K C E P W
Sm021681_Selmo1    - - - - - - - M Q Q R P E D P Y L P P G F R F H P T D E E L V - Y Y L T R K V L F S S F R I S A I A E V D L N K C E P W
 
AT5G53950.1     Q L P G R A K M G E K E W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I F S S K T C A L V G M K K
Sm021681_Selmo1    D L P T K A S M G E K E W Y F Y T L R D R K Y P T G M R T N R A T E A G Y W K A T G K D R N I N S S R T S C L V G M K K
 
AT5G53950.1     T L V F Y K G R A P K G E K S N W V M H E Y R L E G K F S - Y H F I S R S S K D - E W V I S R V F Q K T T L A S T G A V
Sm021681_Selmo1    T L V F Y R G R A P K G L K S N W I M H E Y R L E G E A S Q F N R N A R L P K D S E W V I C R V F Q K - - - - - - - - -
 
AT5G53950.1     S E G G G G G G A T V S V S S G T G P S K K T K V P S T I S R N Y Q E Q P S S P S S V S L P P L L D P T T T L G Y T D S
Sm021681_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G53950.1     S C S Y D S R S T N T T V T A S A I T E H V S C F S T V P T T T T A L G L D V N S F S R L P P P L G F D F D P F P R F V
Sm021681_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G53950.1     S R N V S T Q S N F R S F Q E N F N Q F P Y F G S S S A S T M T S A V N L P S F Q G G G G V S G M N Y W L P A T A E E N
Sm021681_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G53950.1     E S K V G V L H A G L D C I W N Y
Sm021681_Selmo1    - - - - - - - - - - - - - - - - -
 
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