fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G53950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031417 not found in 330aa AT5G53950.1 not_1st 0.4921875 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G53950.1     MDIPYYHYDHGGDSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPW
pt031417_POPTR_ --MESYHHFGDGDT-HLPPGFRFHPTDEELITYYLLKKVLDRNFTGRAIAEVDLNKCEPW
                  :  **:  .**: :****************:***:****  *:.**************

AT5G53950.1     QLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKK
pt031417_POPTR_ ELPGKAKMVEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIHSSKTGALVGMKK
                :***:*** **************************************.**** *******

AT5G53950.1     TLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSE
pt031417_POPTR_ TLVFYRGRAPEGGKSNWVMHEYRLEGKFAYHYLSGCSKDEWVISRVFQKSC---------
                *****:****:* ***************:**::* .*************:          

AT5G53950.1     GGGGGGATVSVSSGTGPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTD---
pt031417_POPTR_ ----GGA--AASSGN-ITKKNRFDTTI--NLYTEANSPSSVSLPPLLDATTTVTTTTLND
                    ***  :.***.  :**.:. :**  *   :..************.***:  *    

AT5G53950.1     -SSCSYDSRSTNTTVTASAITEHVSCFSTVPTTTTA-----LGLDVNSFSRLPPPLGFD-
pt031417_POPTR_ RDSCSYDNHTQH---------EHVSCFSTIAAAAYAAANNNINFDI---AQLPPPPMTDP
                 .*****.:: :         ********:.::: *     :.:*:   ::****   * 

AT5G53950.1     FDPFPRFVSRNVSTQSNFRSFQENFNQFPYFGSSSASTMTSAVNLPSFQGGGGVSGMNYW
pt031417_POPTR_ FSTFPG--NTGVNCFPSLRSIQENL-QLPFLFASPA----SAVAVPPFHGGGATTTMNWM
                *..**   . .*.  ..:**:***: *:*:: :*.*    *** :*.*:***..: **: 

AT5G53950.1     LPATAEENESKVGVLHAGLDCIWNY
pt031417_POPTR_ L----DENEIEKII-----------
                *    :*** :  :
BoxShade v3.31 C (beta, 970507) Output
AT5G53950.1     M D I P Y Y H Y D H G G D S Q Y L P P G F R F H P T D E E L I T H Y L L R K V L D G C F S S R A I A E V D L N K C E P W
pt031417_POPTR_    - - M E S Y H H F G D G D T - H L P P G F R F H P T D E E L I T Y Y L L K K V L D R N F T G R A I A E V D L N K C E P W
 
AT5G53950.1     Q L P G R A K M G E K E W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I F S S K T C A L V G M K K
pt031417_POPTR_    E L P G K A K M V E K E W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I H S S K T G A L V G M K K
 
AT5G53950.1     T L V F Y K G R A P K G E K S N W V M H E Y R L E G K F S Y H F I S R S S K D E W V I S R V F Q K T T L A S T G A V S E
pt031417_POPTR_    T L V F Y R G R A P E G G K S N W V M H E Y R L E G K F A Y H Y L S G C S K D E W V I S R V F Q K S C - - - - - - - - -
 
AT5G53950.1     G G G G G G A T V S V S S G T G P S K K T K V P S T I S R N Y Q E Q P S S P S S V S L P P L L D P T T T L G Y T D - - -
pt031417_POPTR_    - - - - G G A - - A A S S G N - I T K K N R F D T T I - - N L Y T E A N S P S S V S L P P L L D A T T T V T T T T L N D
 
AT5G53950.1     - S S C S Y D S R S T N T T V T A S A I T E H V S C F S T V P T T T T A - - - - - L G L D V N S F S R L P P P L G F D -
pt031417_POPTR_    R D S C S Y D N H T Q H - - - - - - - - - E H V S C F S T I A A A A Y A A A N N N I N F D I - - - A Q L P P P P M T D P
 
AT5G53950.1     F D P F P R F V S R N V S T Q S N F R S F Q E N F N Q F P Y F G S S S A S T M T S A V N L P S F Q G G G G V S G M N Y W
pt031417_POPTR_    F S T F P G - - N T G V N C F P S L R S I Q E N L - Q L P F L F A S P A - - - - S A V A V P P F H G G G A T T T M N W M
 
AT5G53950.1     L P A T A E E N E S K V G V L H A G L D C I W N Y
pt031417_POPTR_    L - - - - D E N E I E K I I - - - - - - - - - - -
 
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