fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G53950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025992 not found in 358aa AT5G53950.1 1st_1st 0.515625 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G53950.1     MDIPYYHYDHGGDSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPW
pt025992_POPTR_ ME-SYHHFDSG--DAHLPPGFRFHPTDEELITYYLLKKVLDSNFTGRAIAEVDLNKCEPW
                *: .*:*:* *  . :****************:***:****. *:.**************

AT5G53950.1     QLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKK
pt025992_POPTR_ ELPGKAKMGEKEWYFFNLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTGALVGMKK
                :***:***********.******************************:**** *******

AT5G53950.1     TLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSE
pt025992_POPTR_ TLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRCSKDEWVISRVFQKSC---SGAASG
                *****:**********************:**::**.*************:    :**.* 

AT5G53950.1     GGGGGGATVSVSSGTGPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDPTTTLGYTDS--
pt025992_POPTR_ G-----------SGSAP-KKNRFNTTI--NLYTEASSPSSVSLPPLLDATTTLTTAASTT
                *           **:.* **.:. :**  *   :.*************.****  : *  

AT5G53950.1     ------SCSYDSRSTNTTVTASAITEHVSCFSTVPTTTTALGL-DVNSFSRL---PPPLG
pt025992_POPTR_ TLNDRDSCSYDSHTQH---------EHVSCFSTIAAAASAAAKHNSNNFDLAPLPPPPMT
                      ******:: :         ********:.::::* .  : *.*.     ***: 

AT5G53950.1     FDFDPFPRFVSRNVSTQSN----FRSFQENFNQFPYFGSSSASTMTSAVNLPSFQGGGGV
pt025992_POPTR_ DSFSRFPR------NTGANGFPSLRSLQENL-QLPFFFSSPP----SAAPVPPFHGGG--
                 .*. ***      .* :*    :**:***: *:*:* **..    **. :*.*:***  

AT5G53950.1     SGMNYWL--PATAEENESKVGVLHAG--------LDCIWNY
pt025992_POPTR_ AAMN-WMVNPEEGRFDGTGAGIGAGGRVAMGPTELDCMWTY
                :.** *:  *  .. : : .*:  .*        ***:*.*
BoxShade v3.31 C (beta, 970507) Output
AT5G53950.1     M D I P Y Y H Y D H G G D S Q Y L P P G F R F H P T D E E L I T H Y L L R K V L D G C F S S R A I A E V D L N K C E P W
pt025992_POPTR_    M E - S Y H H F D S G - - D A H L P P G F R F H P T D E E L I T Y Y L L K K V L D S N F T G R A I A E V D L N K C E P W
 
AT5G53950.1     Q L P G R A K M G E K E W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I F S S K T C A L V G M K K
pt025992_POPTR_    E L P G K A K M G E K E W Y F F N L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I Y S S K T G A L V G M K K
 
AT5G53950.1     T L V F Y K G R A P K G E K S N W V M H E Y R L E G K F S Y H F I S R S S K D E W V I S R V F Q K T T L A S T G A V S E
pt025992_POPTR_    T L V F Y R G R A P K G E K S N W V M H E Y R L E G K F A Y H Y L S R C S K D E W V I S R V F Q K S C - - - S G A A S G
 
AT5G53950.1     G G G G G G A T V S V S S G T G P S K K T K V P S T I S R N Y Q E Q P S S P S S V S L P P L L D P T T T L G Y T D S - -
pt025992_POPTR_    G - - - - - - - - - - - S G S A P - K K N R F N T T I - - N L Y T E A S S P S S V S L P P L L D A T T T L T T A A S T T
 
AT5G53950.1     - - - - - - S C S Y D S R S T N T T V T A S A I T E H V S C F S T V P T T T T A L G L - D V N S F S R L - - - P P P L G
pt025992_POPTR_    T L N D R D S C S Y D S H T Q H - - - - - - - - - E H V S C F S T I A A A A S A A A K H N S N N F D L A P L P P P P M T
 
AT5G53950.1     F D F D P F P R F V S R N V S T Q S N - - - - F R S F Q E N F N Q F P Y F G S S S A S T M T S A V N L P S F Q G G G G V
pt025992_POPTR_    D S F S R F P R - - - - - - N T G A N G F P S L R S L Q E N L - Q L P F F F S S P P - - - - S A A P V P P F H G G G - -
 
AT5G53950.1     S G M N Y W L - - P A T A E E N E S K V G V L H A G - - - - - - - - L D C I W N Y
pt025992_POPTR_    A A M N - W M V N P E E G R F D G T G A G I G A G G R V A M G P T E L D C M W T Y
 
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