fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G53950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os024821 RAIAEIDLNKCEPWELPE in 58/373 AT5G53950.1 1st_1st 0.4296875 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G53950.1     ---MDIPYYHYDHGGDSQY---LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDL
Os024821_Os06t0 MERCSVLGLGGGGGGGGRLDGELPPGFRFHPTDEELITYYLLRKVVDGSFNGRAIAEIDL
                    .:     . **..:    ****************:******:**.*..*****:**

AT5G53950.1     NKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCA
Os024821_Os06t0 NKCEPWELPEKAKMGEKEWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREIRSARTGA
                ******:** :**********:***************** ************* *::* *

AT5G53950.1     LVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKT---T
Os024821_Os06t0 LVGMKKTLVFYRGRAPKGQKTQWVMHEYRLDGTYAYHFLSSSTRDEWVIARIFTKPGVFP
                ***********:******:*::********:*.::***:* *::*****:*:* *.   .

AT5G53950.1     LASTGAVSEGGGGG-------GATVSVSSGTGPSKKTKVPSTISRNYQEQPSSPSSVSLP
Os024821_Os06t0 VVRKGRLGISGGGGDTSCFSDSTSASVGGGGGTSASSALRAPLAE------ASLFAAAAA
                :. .* :. .****       .::.**..* *.* .: : :.::.      :*  :.: .

AT5G53950.1     PLLDPTTTLGYTDSSCSYDSRSTNTTVTASAIT--EHVSCFSTVPTTTTALGLDVNSFSR
Os024821_Os06t0 PAVD-----GADSSNYGGGGGAGSATATANLVTGLELVPCFSTTAHMDASFGTGQYNPAP
                * :*     *  .*. . .. : .:*.**. :*  * *.****..   :::* .  . : 

AT5G53950.1     L-----PPPLGFDFDPFPRFVSRNVSTQSNFRSFQENFNQFPYFGSSSASTMTSAVNLPS
Os024821_Os06t0 LAVEPPPPPPAF----FP-----------SLRSLQENL-QLPLFLSGG---MQAGVSSQP
                *     *** .*    **           .:**:***: *:* * *..   * :.*.  .

AT5G53950.1     FQGGGGV---SGMNYWLPATAEENESKVGVLHAGLD--CIWNY
Os024821_Os06t0 LSGGGAFHWQSGMDVKVEGAVGRAPPQMAVGPGQLDGAFAWGF
                :.***..   ***:  : .:. .  .::.*  . **    *.:
BoxShade v3.31 C (beta, 970507) Output
AT5G53950.1     - - - M D I P Y Y H Y D H G G D S Q Y - - - L P P G F R F H P T D E E L I T H Y L L R K V L D G C F S S R A I A E V D L
Os024821_Os06t0    M E R C S V L G L G G G G G G G G R L D G E L P P G F R F H P T D E E L I T Y Y L L R K V V D G S F N G R A I A E I D L
 
AT5G53950.1     N K C E P W Q L P G R A K M G E K E W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I F S S K T C A
Os024821_Os06t0    N K C E P W E L P E K A K M G E K E W Y F Y S L R D R K Y P T G L R T N R A T G A G Y W K A T G K D R E I R S A R T G A
 
AT5G53950.1     L V G M K K T L V F Y K G R A P K G E K S N W V M H E Y R L E G K F S Y H F I S R S S K D E W V I S R V F Q K T - - - T
Os024821_Os06t0    L V G M K K T L V F Y R G R A P K G Q K T Q W V M H E Y R L D G T Y A Y H F L S S S T R D E W V I A R I F T K P G V F P
 
AT5G53950.1     L A S T G A V S E G G G G G - - - - - - - G A T V S V S S G T G P S K K T K V P S T I S R N Y Q E Q P S S P S S V S L P
Os024821_Os06t0    V V R K G R L G I S G G G G D T S C F S D S T S A S V G G G G G T S A S S A L R A P L A E - - - - - - A S L F A A A A A
 
AT5G53950.1     P L L D P T T T L G Y T D S S C S Y D S R S T N T T V T A S A I T - - E H V S C F S T V P T T T T A L G L D V N S F S R
Os024821_Os06t0    P A V D - - - - - G A D S S N Y G G G G G A G S A T A T A N L V T G L E L V P C F S T T A H M D A S F G T G Q Y N P A P
 
AT5G53950.1     L - - - - - P P P L G F D F D P F P R F V S R N V S T Q S N F R S F Q E N F N Q F P Y F G S S S A S T M T S A V N L P S
Os024821_Os06t0    L A V E P P P P P P A F - - - - F P - - - - - - - - - - - S L R S L Q E N L - Q L P L F L S G G - - - M Q A G V S S Q P
 
AT5G53950.1     F Q G G G G V - - - S G M N Y W L P A T A E E N E S K V G V L H A G L D - - C I W N Y
Os024821_Os06t0    L S G G G A F H W Q S G M D V K V E G A V G R A P P Q M A V G P G Q L D G A F A W G F
 
0