fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G53950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031540 RAIAEIDLNKCEPWELPD in 100/526 AT5G53950.1 1st_1st 0.425 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G53950.1     ----MDIPYYHYDH--------------------------------------------GG
Sb031540_Sorbi1 LHPQNRRASLHYSHSTAAAVPREEQLRSAGRPETETTTMERFGVLGTRLGLDGVGIGGGG
                       .  **.*                                            **

AT5G53950.1     DSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKE
Sb031540_Sorbi1 GGGELPPGFRFHPTDEELITYYLLRKAVDGSFCGRAIAEIDLNKCEPWELPDKAKMGEKE
                ..  ****************:*****.:**.*..*****:********:**.:*******

AT5G53950.1     WYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKG
Sb031540_Sorbi1 WYFYSLRDRKYPTGLRTNRATVAGYWKATGKDREIRSGRSGALVGMKKTLVFYRGRAPKG
                ***:***************** ************* *.:: ************:******

AT5G53950.1     EKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKT--------------TLASTG--
Sb031540_Sorbi1 HKTHWVMHEFRLDGTYAYHFLPTSTRDEWVIARVFQKPGEVPPARKQHHRLGGLSSAGES
                .*::*****:**:*.::***:. *::*****:*****.               *:*:*  

AT5G53950.1     ------AVSEGGGGGGATVSVSSGTGPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDPT
Sb031540_Sorbi1 CFSDSTSASIGGGGGA---SASSAPRP-----LPLTV--------TDASSLSL--FAANA
                      :.* *****.   *.**.. *     :* *:        :..**:**  :   :

AT5G53950.1     TTLGYTDSSC-SYDSRSTNTTVTASAITEHVSCFSTVPTTTTALGLDVNSF-------SR
Sb031540_Sorbi1 AADGDTSSYCGGHGGGAANTGNKLVTGRELVPCFST--STTTGAALDAAALGIGQPYNAA
                :: * *.* * .:.. ::**  .  :  * *.****  :***. .**. ::       : 

AT5G53950.1     LPPPLGFDFDPFPRFVSRNVSTQSNFRS---FQENFNQFPYFGSSSASTMTSAVNLPSFQ
Sb031540_Sorbi1 VPPPLAFEAPPLP-----TPAFFPNLRSSLQVQDNHLQLPLFLSAG--------------
                :****.*:  *:*     . :  .*:**   .*:*. *:* * *:.              

AT5G53950.1     GGGGVSG------MNYWLPATAE---ENES---KVGVLHAGLDCI--WNY
Sb031540_Sorbi1 GGGGLSGTLGGGALHHWPFAGMEVKVEGRSAPPQMAVGPGQLDGAFGWGF
                ****:**      :::*  *  *   *..*   ::.*  . **    *.:
BoxShade v3.31 C (beta, 970507) Output
AT5G53950.1     - - - - M D I P Y Y H Y D H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G G
Sb031540_Sorbi1    L H P Q N R R A S L H Y S H S T A A A V P R E E Q L R S A G R P E T E T T T M E R F G V L G T R L G L D G V G I G G G G
 
AT5G53950.1     D S Q Y L P P G F R F H P T D E E L I T H Y L L R K V L D G C F S S R A I A E V D L N K C E P W Q L P G R A K M G E K E
Sb031540_Sorbi1    G G G E L P P G F R F H P T D E E L I T Y Y L L R K A V D G S F C G R A I A E I D L N K C E P W E L P D K A K M G E K E
 
AT5G53950.1     W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I F S S K T C A L V G M K K T L V F Y K G R A P K G
Sb031540_Sorbi1    W Y F Y S L R D R K Y P T G L R T N R A T V A G Y W K A T G K D R E I R S G R S G A L V G M K K T L V F Y R G R A P K G
 
AT5G53950.1     E K S N W V M H E Y R L E G K F S Y H F I S R S S K D E W V I S R V F Q K T - - - - - - - - - - - - - - T L A S T G - -
Sb031540_Sorbi1    H K T H W V M H E F R L D G T Y A Y H F L P T S T R D E W V I A R V F Q K P G E V P P A R K Q H H R L G G L S S A G E S
 
AT5G53950.1     - - - - - - A V S E G G G G G G A T V S V S S G T G P S K K T K V P S T I S R N Y Q E Q P S S P S S V S L P P L L D P T
Sb031540_Sorbi1    C F S D S T S A S I G G G G G A - - - S A S S A P R P - - - - - L P L T V - - - - - - - - T D A S S L S L - - F A A N A
 
AT5G53950.1     T T L G Y T D S S C - S Y D S R S T N T T V T A S A I T E H V S C F S T V P T T T T A L G L D V N S F - - - - - - - S R
Sb031540_Sorbi1    A A D G D T S S Y C G G H G G G A A N T G N K L V T G R E L V P C F S T - - S T T T G A A L D A A A L G I G Q P Y N A A
 
AT5G53950.1     L P P P L G F D F D P F P R F V S R N V S T Q S N F R S - - - F Q E N F N Q F P Y F G S S S A S T M T S A V N L P S F Q
Sb031540_Sorbi1    V P P P L A F E A P P L P - - - - - T P A F F P N L R S S L Q V Q D N H L Q L P L F L S A G - - - - - - - - - - - - - -
 
AT5G53950.1     G G G G V S G - - - - - - M N Y W L P A T A E - - - E N E S - - - K V G V L H A G L D C I - - W N Y
Sb031540_Sorbi1    G G G G L S G T L G G G A L H H W P F A G M E V K V E G R S A P P Q M A V G P G Q L D G A F G W G F
 
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