fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G53950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034498 not found in 343aa AT5G53950.1 not_1st 0.5125 II
Gm033809 not found in 366aa AT5G53950.1 not_1st 0.5046875 II
Gm016085 not found in 375aa AT5G53950.1 not_1st 0.5 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G53950.1     MDIPYYHYDH-------GGDSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVD
gm033809_Glyma1 MDS-YYHQHHNPHFD--NNNEPHLPPGFRFHPTDEELITYYLLKKVLDSSFTGRAIVEVD
gm016085_Glyma0 MDN-YYHQHHHPHFDNSNNNEPHLPPGFRFHPTDEELITYYLLKKVLDSSFTGRAIVEVD
gm034498_Glyma1 MD----------------HTEAHLPPGFRFHPTDEELITYYLLKKVLDSTFTGRAIAEVD
                **                  . :****************:***:****. *:.***.***

AT5G53950.1     LNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTC
gm033809_Glyma1 LNKCEPWELPEKAKMGEKEWYFYSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTC
gm016085_Glyma0 LNKCEPWELPEKAKMGEKEWYFYSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTC
gm034498_Glyma1 LNKSEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTC
                ***.***:** :**********:*******************************:*****

AT5G53950.1     ALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQK-TTL
gm033809_Glyma1 SLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKEEWVISRVFQK-NT-
gm016085_Glyma0 SLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRSSKDEWVISRVFQK-NT-
gm034498_Glyma1 SLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRNSEDEWVISRVFRKSNTT
                :***********:**********************:**::**.*::********:* .* 

AT5G53950.1     ASTGAVSEGGGGGGATVSVSSGT---GPSKKTKV---PSTISRNYQEQPSSPSSVSLPPL
gm033809_Glyma1 --T--------GGGSTVSSASAATTGGSSKKTRMTTSNNSSNMSLCPEPGSPSSIYLPPL
gm016085_Glyma0 --T--------GGGSTVSAAAAATSGGSSKKTRMTTSNTSSNMSLCPEPGSPSSIYLPPL
gm034498_Glyma1 PIT--------NGGSTMSAST------NSKKTRI---NNTT--SLIHEPGSPSSVFLPPL
                  *        .**:*:* ::       ****::    .:   .   :*.****: ****

AT5G53950.1     LDPT------------TTLGYTD-SSCSYDSR-STNTTVTASAITEHVSCFSTVPTTTTA
gm033809_Glyma1 LESSPYAA--------AAATFNDRERCSFDSA-ANNNQ------REHVSCFSTISG----
gm016085_Glyma0 LESSPYAAASTTTATPAAAAFNDHESCSFNSAVSNNNQ------REHVSCFSTISA----
gm034498_Glyma1 LDSSPYTNT-------TTNTFTDHHNSSYDSA----TK------KEHVSCFSTIAAATAV
                *:.:            ::  :.*   .*::*     .        ********:.     

AT5G53950.1     LG----LDVNSFSR-LPPPLGFDFDPFPRF-------VSRNVSTQSNFRSFQENFNQFPY
gm033809_Glyma1 ---------AAFDHLVPSPEP-PLDPSARFHRNNNNNVGVGISTFPCLRSLHDNLN-LPF
gm016085_Glyma0 ---------AAFDHLVPPPEP-PLDPFARFH-CNNNNVGVGVSTFPCLRSLHDNLN-LPF
gm034498_Glyma1 VSPNNNFNNASFD--LPPSQPLATDPFARFQRN------VGLSAFPSLRSLQDNLQ-LPF
                          :*.  :*..     ** .**          .:*: . :**:::*:: :*:

AT5G53950.1     FGS----SSASTMTSAVNLPSFQGGGGVSGMNYWLPATAE----ENESKVGVLHAGLDCI
gm033809_Glyma1 FFSPTGHISSAEVAS---------FGAVGN---WTAAPEEHRMADSGSGMTIVPSELDCM
gm016085_Glyma0 FFSPMGHVSSADVAS---------FGAVTN---W-PAPEEQRMADGGSGMGIVPSELDCM
gm034498_Glyma1 FFS----TAAAPPFS---------GGGSGDFLSW-PVPE-----DGVSNMPLGVSELDCM
                * *     :::   *          *.  .   * ...      :. * : :  : ***:

AT5G53950.1     WNY
gm033809_Glyma1 WDY
gm016085_Glyma0 WGY
gm034498_Glyma1 WGY
                *.*
BoxShade v3.31 C (beta, 970507) Output
AT5G53950.1     M D I P Y Y H Y D H - - - - - - - G G D S Q Y L P P G F R F H P T D E E L I T H Y L L R K V L D G C F S S R A I A E V D
gm033809_Glyma1    M D S - Y Y H Q H H N P H F D - - N N N E P H L P P G F R F H P T D E E L I T Y Y L L K K V L D S S F T G R A I V E V D
gm016085_Glyma0    M D N - Y Y H Q H H H P H F D N S N N N E P H L P P G F R F H P T D E E L I T Y Y L L K K V L D S S F T G R A I V E V D
gm034498_Glyma1    M D - - - - - - - - - - - - - - - - H T E A H L P P G F R F H P T D E E L I T Y Y L L K K V L D S T F T G R A I A E V D
 
AT5G53950.1     L N K C E P W Q L P G R A K M G E K E W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I F S S K T C
gm033809_Glyma1    L N K C E P W E L P E K A K M G E K E W Y F Y S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I Y S S K T C
gm016085_Glyma0    L N K C E P W E L P E K A K M G E K E W Y F Y S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I Y S S K T C
gm034498_Glyma1    L N K S E P W E L P E K A K M G E K E W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I Y S S K T C
 
AT5G53950.1     A L V G M K K T L V F Y K G R A P K G E K S N W V M H E Y R L E G K F S Y H F I S R S S K D E W V I S R V F Q K - T T L
gm033809_Glyma1    S L V G M K K T L V F Y R G R A P K G E K S N W V M H E Y R L E G K F A Y H Y L S R S S K E E W V I S R V F Q K - N T -
gm016085_Glyma0    S L V G M K K T L V F Y R G R A P K G E K S N W V M H E Y R L E G K F A Y H Y L S R S S K D E W V I S R V F Q K - N T -
gm034498_Glyma1    S L V G M K K T L V F Y R G R A P K G E K S N W V M H E Y R L E G K F A Y H Y L S R N S E D E W V I S R V F R K S N T T
 
AT5G53950.1     A S T G A V S E G G G G G G A T V S V S S G T - - - G P S K K T K V - - - P S T I S R N Y Q E Q P S S P S S V S L P P L
gm033809_Glyma1    - - T - - - - - - - - G G G S T V S S A S A A T T G G S S K K T R M T T S N N S S N M S L C P E P G S P S S I Y L P P L
gm016085_Glyma0    - - T - - - - - - - - G G G S T V S A A A A A T S G G S S K K T R M T T S N T S S N M S L C P E P G S P S S I Y L P P L
gm034498_Glyma1    P I T - - - - - - - - N G G S T M S A S T - - - - - - N S K K T R I - - - N N T T - - S L I H E P G S P S S V F L P P L
 
AT5G53950.1     L D P T - - - - - - - - - - - - T T L G Y T D - S S C S Y D S R - S T N T T V T A S A I T E H V S C F S T V P T T T T A
gm033809_Glyma1    L E S S P Y A A - - - - - - - - A A A T F N D R E R C S F D S A - A N N N Q - - - - - - R E H V S C F S T I S G - - - -
gm016085_Glyma0    L E S S P Y A A A S T T T A T P A A A A F N D H E S C S F N S A V S N N N Q - - - - - - R E H V S C F S T I S A - - - -
gm034498_Glyma1    L D S S P Y T N T - - - - - - - T T N T F T D H H N S S Y D S A - - - - T K - - - - - - K E H V S C F S T I A A A T A V
 
AT5G53950.1     L G - - - - L D V N S F S R - L P P P L G F D F D P F P R F - - - - - - - V S R N V S T Q S N F R S F Q E N F N Q F P Y
gm033809_Glyma1    - - - - - - - - - A A F D H L V P S P E P - P L D P S A R F H R N N N N N V G V G I S T F P C L R S L H D N L N - L P F
gm016085_Glyma0    - - - - - - - - - A A F D H L V P P P E P - P L D P F A R F H - C N N N N V G V G V S T F P C L R S L H D N L N - L P F
gm034498_Glyma1    V S P N N N F N N A S F D - - L P P S Q P L A T D P F A R F Q R N - - - - - - V G L S A F P S L R S L Q D N L Q - L P F
 
AT5G53950.1     F G S - - - - S S A S T M T S A V N L P S F Q G G G G V S G M N Y W L P A T A E - - - - E N E S K V G V L H A G L D C I
gm033809_Glyma1    F F S P T G H I S S A E V A S - - - - - - - - - F G A V G N - - - W T A A P E E H R M A D S G S G M T I V P S E L D C M
gm016085_Glyma0    F F S P M G H V S S A D V A S - - - - - - - - - F G A V T N - - - W - P A P E E Q R M A D G G S G M G I V P S E L D C M
gm034498_Glyma1    F F S - - - - T A A A P P F S - - - - - - - - - G G G S G D F L S W - P V P E - - - - - D G V S N M P L G V S E L D C M
 
AT5G53950.1     W N Y
gm033809_Glyma1    W D Y
gm016085_Glyma0    W G Y
gm034498_Glyma1    W G Y
 
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