fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G53950.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037407 not found in 352aa AT5G53950.1 1st_1st 0.5203125 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G53950.1     MD-IPYYHYDHGGDSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEP
gm037407_Glyma1 MDNSSYHHLDH--TEAHLPPGFRFHPTDEELITYYLLKKVLDSTFTGRAIAEVDLNKSEP
                **  .*:* **   . :****************:***:****. *:.**********.**

AT5G53950.1     WQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMK
gm037407_Glyma1 WELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVGMK
                *:** :******************************************:*****:*****

AT5G53950.1     KTLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVS
gm037407_Glyma1 KTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRNSKDEWVISRVFQKSNTATN----
                ******:**********************:**::**.*************:. *:.    

AT5G53950.1     EGGGGGGATVSVSSGTGPSKKTKVPSTISRNYQEQPSSPSSVSLPPLLDP---TTTLGYT
gm037407_Glyma1 ----NGGSVMSASSN---SKKTRMNSTTSLIH--EPSSPSSVFLPPLLDTSPYTNTANFT
                    .**:.:*.**.   ****:: ** *  :  :******* ******.   *.* .:*

AT5G53950.1     DS-SCSYDSRSTNTTVTASAITEHVSCFSTVPTTTTALGLDVNSFSRLPPPLGFDF----
gm037407_Glyma1 DRHNGSYDSITKK---------EHVSCFSTIAAATTAV-VSPNNFNN----AGFDLSPSQ
                *  . **** :.:         ********:.::***: :. *.*..     ***:    

AT5G53950.1     ----DPFPRFVSRNV--STQSNFRSFQENFNQFPYFGSSSASTMTSAVNLPSFQGGGGVS
gm037407_Glyma1 PLATDPFARF-QRNVDFSAFPSLRSLQDNL-QFPFVFSTAA---------PPFSGGGSGD
                    ***.** .***  *: ..:**:*:*: ***:. *::*         *.*.***. .

AT5G53950.1     GMNYWLPATAEENESKVGVLH-----AGLDCIWNY
gm037407_Glyma1 FLSWPVP---EEQRLIDGVSNMPLGVSELDCMWSY
                 :.: :*   **:.   ** :     : ***:*.*
BoxShade v3.31 C (beta, 970507) Output
AT5G53950.1     M D - I P Y Y H Y D H G G D S Q Y L P P G F R F H P T D E E L I T H Y L L R K V L D G C F S S R A I A E V D L N K C E P
gm037407_Glyma1    M D N S S Y H H L D H - - T E A H L P P G F R F H P T D E E L I T Y Y L L K K V L D S T F T G R A I A E V D L N K S E P
 
AT5G53950.1     W Q L P G R A K M G E K E W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I F S S K T C A L V G M K
gm037407_Glyma1    W E L P E K A K M G E K E W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I Y S S K T C S L V G M K
 
AT5G53950.1     K T L V F Y K G R A P K G E K S N W V M H E Y R L E G K F S Y H F I S R S S K D E W V I S R V F Q K T T L A S T G A V S
gm037407_Glyma1    K T L V F Y R G R A P K G E K S N W V M H E Y R L E G K F A Y H Y L S R N S K D E W V I S R V F Q K S N T A T N - - - -
 
AT5G53950.1     E G G G G G G A T V S V S S G T G P S K K T K V P S T I S R N Y Q E Q P S S P S S V S L P P L L D P - - - T T T L G Y T
gm037407_Glyma1    - - - - N G G S V M S A S S N - - - S K K T R M N S T T S L I H - - E P S S P S S V F L P P L L D T S P Y T N T A N F T
 
AT5G53950.1     D S - S C S Y D S R S T N T T V T A S A I T E H V S C F S T V P T T T T A L G L D V N S F S R L P P P L G F D F - - - -
gm037407_Glyma1    D R H N G S Y D S I T K K - - - - - - - - - E H V S C F S T I A A A T T A V - V S P N N F N N - - - - A G F D L S P S Q
 
AT5G53950.1     - - - - D P F P R F V S R N V - - S T Q S N F R S F Q E N F N Q F P Y F G S S S A S T M T S A V N L P S F Q G G G G V S
gm037407_Glyma1    P L A T D P F A R F - Q R N V D F S A F P S L R S L Q D N L - Q F P F V F S T A A - - - - - - - - - P P F S G G G S G D
 
AT5G53950.1     G M N Y W L P A T A E E N E S K V G V L H - - - - - A G L D C I W N Y
gm037407_Glyma1    F L S W P V P - - - E E Q R L I D G V S N M P L G V S E L D C M W S Y
 
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