fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp002778 not found in 471aa AT5G15310.1 1st_not 0.401923076 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G54230.1     MGKSSSSEESEVKKGPWTPEEDEKLVGYIQTHGPGKWRTLPKNAGLKRCGKSCRLRWTNY
pp002778_Pp1s31 MGRTPCCDKMGLKKGPWTPDEDQKLVTYIQRNGHGSWRALPKHAGLLRCGKSCRLRWTNY
                **::...::  :*******:**:*** *** :* *.**:***:*** *************

AT5G54230.1     LRPDIKRGEFSLQEEETIIQLHRLLGNKWSAIAIHLPGRTDNEIKNYWNTHIKKKLLRMG
pp002778_Pp1s31 LRPDIKRGRFSFEEEQVIIHLHGILGNRWSAIAAHLPGRTDNEIKNYWNTHLRKRLLQMG
                ********.**::**:.**:** :***:***** *****************::*:**:**

AT5G54230.1     IDPVTHCPRINL----LQLSSFLTSSLFKSMSQPMNTPFDLTTSNINPDILNHLTA----
pp002778_Pp1s31 IDPVTHKVRSNLLIENLDLKPMVSSTL-SHMSQWDRVRMEM-EARLSSDYFAKSSAHGAA
                ******  * **    *:*..:::*:* . ***  .. :::  :.:..* : : :*    

AT5G54230.1     ------------------SLNNVQTESYQPNQQLQNDLNTDQTTFTGLLNSTPPVQ----
pp002778_Pp1s31 IFEASGTSASFIKAPSDCSMRSWKTQVSE--SLLRRDF--------GVLEKLPPCSMDLQ
                                  *:.. :*:  :  . *:.*:        *:*:. ** .    

AT5G54230.1     -----WQNN--------GEYLGDYHSYTGTG-----------------------------
pp002778_Pp1s31 TVLQDWEDSLHCQPMEPGLYDSQMRAKTHSGSHSGYSQTPRNDNCSGTTVTDLAARFETF
                     *::.        * * .: :: * :*                             

AT5G54230.1     ------DPSNNKVPQAGNYSSA-------------------AFVSDHINDGENFKAGWNF
pp002778_Pp1s31 PSFHQTSPSPSPLPQTSQISDSFTSSGTKLFPDLPKPNSLPSMIPEHFSPTSTLSSPFGT
                      .** . :**:.: *.:                   :::.:*:.  ..:.: :. 

AT5G54230.1     SSS--MLAGTSS------SSSTPLN-SSSTFYVN-------GGSEDDRESFGSDMLMFHH
pp002778_Pp1s31 SPSDFMVPPPSSNCEIAFSTSPPLQLPSPTFWTSLSAPTTMGAGDLQLPSEIPELLMELH
                *.*  *:. .**      *:*.**: .*.**:..       *..: :  *  .::**  *

AT5G54230.1     -------------------------------HHDHNNNALNLS-----------------
pp002778_Pp1s31 AEPAVPDLIVATVPTTTAGTPGWTSQQGLIESKDYWANMLHLVGPPASQQLSTLLSTPAR
                                                :*:  * *:*                  

AT5G54230.1     ---
pp002778_Pp1s31 LTR
BoxShade v3.31 C (beta, 970507) Output
AT5G54230.1     M G K S S S S E E S E V K K G P W T P E E D E K L V G Y I Q T H G P G K W R T L P K N A G L K R C G K S C R L R W T N Y
pp002778_Pp1s31    M G R T P C C D K M G L K K G P W T P D E D Q K L V T Y I Q R N G H G S W R A L P K H A G L L R C G K S C R L R W T N Y
 
AT5G54230.1     L R P D I K R G E F S L Q E E E T I I Q L H R L L G N K W S A I A I H L P G R T D N E I K N Y W N T H I K K K L L R M G
pp002778_Pp1s31    L R P D I K R G R F S F E E E Q V I I H L H G I L G N R W S A I A A H L P G R T D N E I K N Y W N T H L R K R L L Q M G
 
AT5G54230.1     I D P V T H C P R I N L - - - - L Q L S S F L T S S L F K S M S Q P M N T P F D L T T S N I N P D I L N H L T A - - - -
pp002778_Pp1s31    I D P V T H K V R S N L L I E N L D L K P M V S S T L - S H M S Q W D R V R M E M - E A R L S S D Y F A K S S A H G A A
 
AT5G54230.1     - - - - - - - - - - - - - - - - - - S L N N V Q T E S Y Q P N Q Q L Q N D L N T D Q T T F T G L L N S T P P V Q - - - -
pp002778_Pp1s31    I F E A S G T S A S F I K A P S D C S M R S W K T Q V S E - - S L L R R D F - - - - - - - - G V L E K L P P C S M D L Q
 
AT5G54230.1     - - - - - W Q N N - - - - - - - - G E Y L G D Y H S Y T G T G - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp002778_Pp1s31    T V L Q D W E D S L H C Q P M E P G L Y D S Q M R A K T H S G S H S G Y S Q T P R N D N C S G T T V T D L A A R F E T F
 
AT5G54230.1     - - - - - - D P S N N K V P Q A G N Y S S A - - - - - - - - - - - - - - - - - - - A F V S D H I N D G E N F K A G W N F
pp002778_Pp1s31    P S F H Q T S P S P S P L P Q T S Q I S D S F T S S G T K L F P D L P K P N S L P S M I P E H F S P T S T L S S P F G T
 
AT5G54230.1     S S S - - M L A G T S S - - - - - - S S S T P L N - S S S T F Y V N - - - - - - - G G S E D D R E S F G S D M L M F H H
pp002778_Pp1s31    S P S D F M V P P P S S N C E I A F S T S P P L Q L P S P T F W T S L S A P T T M G A G D L Q L P S E I P E L L M E L H
 
AT5G54230.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H D H N N N A L N L S - - - - - - - - - - - - - - - - -
pp002778_Pp1s31    A E P A V P D L I V A T V P T T T A G T P G W T S Q Q G L I E S K D Y W A N M L H L V G P P A S Q Q L S T L L S T P A R
 
AT5G54230.1     - - -
pp002778_Pp1s31    L T R
 
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