fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020494 not found in 376aa AT4G21440.1 1st_not 0.438461538 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G54230.1     MGKSSSSEESEVKKGPWTPEEDEKLVGYIQTHGPGKWRTLPKNAGLKRCGKSCRLRWTNY
pt020494_POPTR_ MGRAPCCDKNGLKKGPWTPEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNY
                **::...::. :**********:***.***.** *:**********:*************

AT5G54230.1     LRPDIKRGEFSLQEEETIIQLHRLLGNKWSAIAIHLPGRTDNEIKNYWNTHIKKKLLRMG
pt020494_POPTR_ LRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG
                ********.**::********* :********* :*****************:*:*****

AT5G54230.1     IDPVTHCPRINLLQLSSFLTSSLFKS-----MSQPMNTPFDLTTSNINPDILNHLTASLN
pt020494_POPTR_ IDPVTHSPRLDLLDLSSILSSSLYNSSDQMNMSRMLGVP-----PLVNPGLLRLATSLLS
                ******.**::**:***:*:***::*     **: :..*     . :**.:*.  *: *.

AT5G54230.1     ------------NVQTESYQPNQQLQN---------------------------------
pt020494_POPTR_ SQRDQTQNFVIQNGQEENHLPNPQVQQSQYESMIHQANIQFQTPGQEMPTCTTLTTSPCV
                            * * *.: ** *:*:                                 

AT5G54230.1     ---------DLNTDQTTFTGLLNSTPPV-------QWQNNGEYLG-----DYH-----SY
pt020494_POPTR_ TFSNEARIMDPNVDQYQSSTITNFSSPNSQFSTHDQWQNNG--MGSNLAEDYYVPAVSSY
                         * *.**   : : * :.*        ******  :*     **:     **

AT5G54230.1     TGTG-------DPSNNKVPQAGNYSSAAFVSDHINDGENFKAGWNFSSSMLAGTSSSSST
pt020494_POPTR_ NSNGYYGSDLMDPSS---------ETSTFISNSSNQ--------NFGFASVLSTPSSSPT
                ...*       ***.         .:::*:*:  *:        **. : : .*.***.*

AT5G54230.1     PLNSSSTFYVNGGSEDDRESFGSDMLMFHHHHDHNNNALNLS
pt020494_POPTR_ PLNSNSTYINSSSAEDERESYCSNILKF--EIPDILDAINFM
                ****.**:  ...:**:***: *::* *  .  .  :*:*:
BoxShade v3.31 C (beta, 970507) Output
AT5G54230.1     M G K S S S S E E S E V K K G P W T P E E D E K L V G Y I Q T H G P G K W R T L P K N A G L K R C G K S C R L R W T N Y
pt020494_POPTR_    M G R A P C C D K N G L K K G P W T P E E D Q K L V D Y I Q K H G Y G N W R T L P K N A G L Q R C G K S C R L R W T N Y
 
AT5G54230.1     L R P D I K R G E F S L Q E E E T I I Q L H R L L G N K W S A I A I H L P G R T D N E I K N Y W N T H I K K K L L R M G
pt020494_POPTR_    L R P D I K R G R F S F E E E E T I I Q L H S I L G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L R M G
 
AT5G54230.1     I D P V T H C P R I N L L Q L S S F L T S S L F K S - - - - - M S Q P M N T P F D L T T S N I N P D I L N H L T A S L N
pt020494_POPTR_    I D P V T H S P R L D L L D L S S I L S S S L Y N S S D Q M N M S R M L G V P - - - - - P L V N P G L L R L A T S L L S
 
AT5G54230.1     - - - - - - - - - - - - N V Q T E S Y Q P N Q Q L Q N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt020494_POPTR_    S Q R D Q T Q N F V I Q N G Q E E N H L P N P Q V Q Q S Q Y E S M I H Q A N I Q F Q T P G Q E M P T C T T L T T S P C V
 
AT5G54230.1     - - - - - - - - - D L N T D Q T T F T G L L N S T P P V - - - - - - - Q W Q N N G E Y L G - - - - - D Y H - - - - - S Y
pt020494_POPTR_    T F S N E A R I M D P N V D Q Y Q S S T I T N F S S P N S Q F S T H D Q W Q N N G - - M G S N L A E D Y Y V P A V S S Y
 
AT5G54230.1     T G T G - - - - - - - D P S N N K V P Q A G N Y S S A A F V S D H I N D G E N F K A G W N F S S S M L A G T S S S S S T
pt020494_POPTR_    N S N G Y Y G S D L M D P S S - - - - - - - - - E T S T F I S N S S N Q - - - - - - - - N F G F A S V L S T P S S S P T
 
AT5G54230.1     P L N S S S T F Y V N G G S E D D R E S F G S D M L M F H H H H D H N N N A L N L S
pt020494_POPTR_    P L N S N S T Y I N S S S A E D E R E S Y C S N I L K F - - E I P D I L D A I N F M
 
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