fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023923 not found in 508aa AT4G05100.1 1st_not 0.438461538 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G54230.1     MGKSSSSEESEVKKGPWTPEEDEKLVGYIQTHGPGKWRTLPKNAGLKRCGKSCRLRWTNY
Sb023923_Sorbi1 MGRAPCCEKSGMKKGPWTPEEDEKLIAYIKKHGQGNWRTLPKNAGLARCGKSCRLRWTNY
                **::...*:* :*************:.**:.** *:********** *************

AT5G54230.1     LRPDIKRGEFSLQEEETIIQLHRLLGNKWSAIAIHLPGRTDNEIKNYWNTHIKKKLLRMG
Sb023923_Sorbi1 LRPDIKRGRFSFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG
                ********.**::********* :********* :*****************:*:*****

AT5G54230.1     IDPVTHCPRINLLQLSSFLTSSLFKSMSQPMNTPFDLTTSNIN-----------PDILNH
Sb023923_Sorbi1 IDPVTHAPRLDLLDLSALL---------KPAAAAYYPTQADLDTLRALEPLANYPDLLRL
                ******.**::**:**::*         :*  :.:  * ::::           **:*. 

AT5G54230.1     LTASLNN------------------VQTESYQ-------------PNQQLQN--------
Sb023923_Sorbi1 ASTLLSSGPPAIGDHHQNGQLLPWILQAQMAQQAAAAMAQQVAPPPQQQAEQFMQAGAAC
                 :: *..                  :*::  *             *:** ::        

AT5G54230.1     ------DLNTDQTTFTGLLNST-------------PPVQWQNNGEYLGDYHSYTGTGDPS
Sb023923_Sorbi1 QMPDLVHMNSNPTTVQQQLAAAHQDMAAAACHSMQPP----NNTGYEVDSLDV-----PA
                      .:*:: **.   * ::             **    **  *  *  .      *:

AT5G54230.1     NNKVPQAGN------YSSAAFVSDHINDGENFKAGWNFSSSMLAGTSSSSSTPL------
Sb023923_Sorbi1 LMQMVQAADASNLQQWSSTVTSSSNNNNNNNNNVG--------SGVSTPSSSPVARLNHS
                  :: **.:      :**:.  *.: *:.:* :.*        :*.*:.**:*:      

AT5G54230.1     NSSSTFYVNGGSEDDRESFGSDMLMFHHHHDHNNNALNLS---
Sb023923_Sorbi1 TSTTTTTYGGASASTSNDAAAAAALFNMQL---SELLDVSDYM
                .*::*   .*.* .  :. .:   :*: :    .: *::*
BoxShade v3.31 C (beta, 970507) Output
AT5G54230.1     M G K S S S S E E S E V K K G P W T P E E D E K L V G Y I Q T H G P G K W R T L P K N A G L K R C G K S C R L R W T N Y
Sb023923_Sorbi1    M G R A P C C E K S G M K K G P W T P E E D E K L I A Y I K K H G Q G N W R T L P K N A G L A R C G K S C R L R W T N Y
 
AT5G54230.1     L R P D I K R G E F S L Q E E E T I I Q L H R L L G N K W S A I A I H L P G R T D N E I K N Y W N T H I K K K L L R M G
Sb023923_Sorbi1    L R P D I K R G R F S F E E E E T I I Q L H S I L G N K W S A I A A R L P G R T D N E I K N Y W N T H I R K R L L R M G
 
AT5G54230.1     I D P V T H C P R I N L L Q L S S F L T S S L F K S M S Q P M N T P F D L T T S N I N - - - - - - - - - - - P D I L N H
Sb023923_Sorbi1    I D P V T H A P R L D L L D L S A L L - - - - - - - - - K P A A A A Y Y P T Q A D L D T L R A L E P L A N Y P D L L R L
 
AT5G54230.1     L T A S L N N - - - - - - - - - - - - - - - - - - V Q T E S Y Q - - - - - - - - - - - - - P N Q Q L Q N - - - - - - - -
Sb023923_Sorbi1    A S T L L S S G P P A I G D H H Q N G Q L L P W I L Q A Q M A Q Q A A A A M A Q Q V A P P P Q Q Q A E Q F M Q A G A A C
 
AT5G54230.1     - - - - - - D L N T D Q T T F T G L L N S T - - - - - - - - - - - - - P P V Q W Q N N G E Y L G D Y H S Y T G T G D P S
Sb023923_Sorbi1    Q M P D L V H M N S N P T T V Q Q Q L A A A H Q D M A A A A C H S M Q P P - - - - N N T G Y E V D S L D V - - - - - P A
 
AT5G54230.1     N N K V P Q A G N - - - - - - Y S S A A F V S D H I N D G E N F K A G W N F S S S M L A G T S S S S S T P L - - - - - -
Sb023923_Sorbi1    L M Q M V Q A A D A S N L Q Q W S S T V T S S S N N N N N N N N N V G - - - - - - - - S G V S T P S S S P V A R L N H S
 
AT5G54230.1     N S S S T F Y V N G G S E D D R E S F G S D M L M F H H H H D H N N N A L N L S - - -
Sb023923_Sorbi1    T S T T T T T Y G G A S A S T S N D A A A A A A L F N M Q L - - - S E L L D V S D Y M
 
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