fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015849 not found in 356aa AT3G01140.1 not_not 0.407692307 III
Sb010610 not found in 342aa AT5G15310.1 not_not 0.405769230 III
Sb027621 not found in 432aa AT1G34670.1 not_not 0.405769230 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G54230.1     ---------------------------------MGKSSSSEE-SEVKKGPWTPEEDEKLV
Sb015849_Sorbi1 ---------------------------------MGRSPCCEK-IGLKKGPWTPEEDQKLL
Sb010610_Sorbi1 ---------------------------------MGRSPCCEKEAGLKKGPWTPEEDQKLL
Sb027621_Sorbi1 QEASRAKGGCRQVVSLLPNPTCTTLPPVPFHLSMGRSPCCDE-NGLKKGPWTPEEDQKLM
                                                 **:*...::   :**********:**:

AT5G54230.1     GYIQTHGPGKWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGEFSLQEEETIIQLHRLLG
Sb015849_Sorbi1 AFIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLG
Sb010610_Sorbi1 AFIEQHGHGCWRSLPAKAGLRRCGKSCRLRWTNYLRPDIKRGKFTLQEEQTIIQLHALLG
Sb027621_Sorbi1 EYIQKHGHGSWRALPRLAGLNRCGKSCRLRWTNYLRPDIKRGKFTQEEEQTILQLHSVLG
                 :*: ** * **:**  ***.*********************:*: :**:**:*** :**

AT5G54230.1     NKWSAIAIHLPGRTDNEIKNYWNTHIKKKLLRMGIDPVTHCPRINLLQLSSFLTSS----
Sb015849_Sorbi1 NRWSAIATHLPNRTDNEIKNYWNTHLKKRLAKMGIDPVTHK------SLSGTLTGTTNNK
Sb010610_Sorbi1 NRWSSIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPRADLGASSGSAAGAGAGA
Sb027621_Sorbi1 NKWSAIAKHLPGRTDNEIKNFWNTHLKKKLIQMGFDPMTHRPRTDFFAALPQLI------
                *:**:** *** ********:****:**:* :**:**:**                    

AT5G54230.1     ---LFKSMSQPMN-TPFDLTTSNINPDILNHLTASLNNVQ-------TESYQPNQQ----
Sb015849_Sorbi1 SAKAAASLSHMAQ---WE--SARLEAEARLARESKIR----------TATPTPTALHAQP
Sb010610_Sorbi1 RYRAAAHLNHTAS---WE--SARLEAEARLAREAKLR----------AIVSPPPAPAPGP
Sb027621_Sorbi1 ---ALANLRQLVEQRPWDDHTARIQVEA--VQAAKLQCLQNLLQSAASIATSPSSSSINT
                       : :  .   ::  ::.:: :      :.:.          :    *       

AT5G54230.1     ------------------------LQNDLNTDQTTFTGL---LNSTPPV---QWQNNGEY
Sb015849_Sorbi1 TNVPASAASPCLDVLHGWQGAKIDLESP--TSTLTFTGSNSGMLPTPRTNRLEVSESNSV
Sb010610_Sorbi1 GTGPAFISG---------------LESP--TSTLSF------------------SESAQL
Sb027621_Sorbi1 NTIPSDLEQ-------------IGLLSPPQMSSLST-------LPSPSF-----LES---
                                        * .    .  :                    :.   

AT5G54230.1     LGDYHSYTGTGDPSNNKV--------------------PQAGNYSSAAFVSDHINDGENF
Sb015849_Sorbi1 MWHQRSDELEGEENDWQIFSKHQVLELDSKEREDDFIGCEEPWFSGMA------------
Sb010610_Sorbi1 FANAPPHDTHGT-------PRHALTPPRSYEEAFGELQPQQQRFGDAA------------
Sb027621_Sorbi1 --------ISGQ---------------------------------DIA------------
                          *                                  . *            

AT5G54230.1     KAGWNFSSSMLAGTSSSS-------STPLNSSSTFYVNGGSEDDRESFGSDMLMFHHHHD
Sb015849_Sorbi1 GVGSGFTSMLFDVSNEHD--ASECWGESNNGHTEHSNQASDEEDKNYWNGVLDMVNSELT
Sb010610_Sorbi1 APGFVLAGVLLDSSVAGA--DQQRFAASSTDASVSVSEQQEEEDKGYWSSILNMVNSSMS
Sb027621_Sorbi1 AAG-----QLPDIQIPSSFFEQQPTSNDANQHSDFTPKSSVEGENGTPKTLLLSENS---
                  *      :               .   .  :    :   * :.      :   :    

AT5G54230.1     HNNNALN---LS----------------------------------
Sb015849_Sorbi1 PQSPPLV---------------------------------------
Sb010610_Sorbi1 SSSSSLTS---------------DAVTDPAMYLPAAAAAEF-----
Sb027621_Sorbi1 --LPPLTDFPISNLGDACGASSCDGSSIPFPSWPELFDEQFICEFV
                    .*
BoxShade v3.31 C (beta, 970507) Output
AT5G54230.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G K S S S S E E - S E V K K G P W T P E E D E K L V
Sb015849_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R S P C C E K - I G L K K G P W T P E E D Q K L L
Sb010610_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G R S P C C E K E A G L K K G P W T P E E D Q K L L
Sb027621_Sorbi1    Q E A S R A K G G C R Q V V S L L P N P T C T T L P P V P F H L S M G R S P C C D E - N G L K K G P W T P E E D Q K L M
 
AT5G54230.1     G Y I Q T H G P G K W R T L P K N A G L K R C G K S C R L R W T N Y L R P D I K R G E F S L Q E E E T I I Q L H R L L G
Sb015849_Sorbi1    A F I E E H G H G S W R A L P A K A G L Q R C G K S C R L R W T N Y L R P D I K R G K F S L Q E E Q T I I Q L H A L L G
Sb010610_Sorbi1    A F I E Q H G H G C W R S L P A K A G L R R C G K S C R L R W T N Y L R P D I K R G K F T L Q E E Q T I I Q L H A L L G
Sb027621_Sorbi1    E Y I Q K H G H G S W R A L P R L A G L N R C G K S C R L R W T N Y L R P D I K R G K F T Q E E E Q T I L Q L H S V L G
 
AT5G54230.1     N K W S A I A I H L P G R T D N E I K N Y W N T H I K K K L L R M G I D P V T H C P R I N L L Q L S S F L T S S - - - -
Sb015849_Sorbi1    N R W S A I A T H L P N R T D N E I K N Y W N T H L K K R L A K M G I D P V T H K - - - - - - S L S G T L T G T T N N K
Sb010610_Sorbi1    N R W S S I A T H L P K R T D N E I K N Y W N T H L K K R L A K M G I D P V T H K P R A D L G A S S G S A A G A G A G A
Sb027621_Sorbi1    N K W S A I A K H L P G R T D N E I K N F W N T H L K K K L I Q M G F D P M T H R P R T D F F A A L P Q L I - - - - - -
 
AT5G54230.1     - - - L F K S M S Q P M N - T P F D L T T S N I N P D I L N H L T A S L N N V Q - - - - - - - T E S Y Q P N Q Q - - - -
Sb015849_Sorbi1    S A K A A A S L S H M A Q - - - W E - - S A R L E A E A R L A R E S K I R - - - - - - - - - - T A T P T P T A L H A Q P
Sb010610_Sorbi1    R Y R A A A H L N H T A S - - - W E - - S A R L E A E A R L A R E A K L R - - - - - - - - - - A I V S P P P A P A P G P
Sb027621_Sorbi1    - - - A L A N L R Q L V E Q R P W D D H T A R I Q V E A - - V Q A A K L Q C L Q N L L Q S A A S I A T S P S S S S I N T
 
AT5G54230.1     - - - - - - - - - - - - - - - - - - - - - - - - L Q N D L N T D Q T T F T G L - - - L N S T P P V - - - Q W Q N N G E Y
Sb015849_Sorbi1    T N V P A S A A S P C L D V L H G W Q G A K I D L E S P - - T S T L T F T G S N S G M L P T P R T N R L E V S E S N S V
Sb010610_Sorbi1    G T G P A F I S G - - - - - - - - - - - - - - - L E S P - - T S T L S F - - - - - - - - - - - - - - - - - - S E S A Q L
Sb027621_Sorbi1    N T I P S D L E Q - - - - - - - - - - - - - I G L L S P P Q M S S L S T - - - - - - - L P S P S F - - - - - L E S - - -
 
AT5G54230.1     L G D Y H S Y T G T G D P S N N K V - - - - - - - - - - - - - - - - - - - - P Q A G N Y S S A A F V S D H I N D G E N F
Sb015849_Sorbi1    M W H Q R S D E L E G E E N D W Q I F S K H Q V L E L D S K E R E D D F I G C E E P W F S G M A - - - - - - - - - - - -
Sb010610_Sorbi1    F A N A P P H D T H G T - - - - - - - P R H A L T P P R S Y E E A F G E L Q P Q Q Q R F G D A A - - - - - - - - - - - -
Sb027621_Sorbi1    - - - - - - - - I S G Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D I A - - - - - - - - - - - -
 
AT5G54230.1     K A G W N F S S S M L A G T S S S S - - - - - - - S T P L N S S S T F Y V N G G S E D D R E S F G S D M L M F H H H H D
Sb015849_Sorbi1    G V G S G F T S M L F D V S N E H D - - A S E C W G E S N N G H T E H S N Q A S D E E D K N Y W N G V L D M V N S E L T
Sb010610_Sorbi1    A P G F V L A G V L L D S S V A G A - - D Q Q R F A A S S T D A S V S V S E Q Q E E E D K G Y W S S I L N M V N S S M S
Sb027621_Sorbi1    A A G - - - - - Q L P D I Q I P S S F F E Q Q P T S N D A N Q H S D F T P K S S V E G E N G T P K T L L L S E N S - - -
 
AT5G54230.1     H N N N A L N - - - L S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb015849_Sorbi1    P Q S P P L V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb010610_Sorbi1    S S S S S L T S - - - - - - - - - - - - - - - D A V T D P A M Y L P A A A A A E F - - - - -
Sb027621_Sorbi1    - - L P P L T D F P I S N L G D A C G A S S C D G S S I P F P S W P E L F D E Q F I C E F V
 
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