fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037495 not found in 345aa AT4G21440.1 1st_not 0.446153846 II
Gm034415 not found in 322aa AT5G54230.1 not_1st 0.444230769 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G54230.1     MGKSSSSEESEVKKGPWTPEEDEKLVGYIQTHGPGKWRTLPKNAGLKRCGKSCRLRWTNY
gm034415_Glyma1 MAK-SSSEKNGLKKGPWTPEEDQKLIDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY
gm037495_Glyma1 MAK-SSTEKNGLKKGPWTPEEDQKLIDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANY
                *.* **:*:. :**********:**:.***.** ***********************:**

AT5G54230.1     LRPDIKRGEFSLQEEETIIQLHRLLGNKWSAIAIHLPGRTDNEIKNYWNTHIKKKLLRMG
gm034415_Glyma1 LRPDIKRGRFSFEEEEAIIQLHSVLGNKWSTIAANLPGRTDNEIKNYWNTHIKKKLLKMG
gm037495_Glyma1 LRPDIKRGRFSFEEEEAIIQLHSVLGNKWSTIAANLPGRTDNEIKNYWNTHIKKKLLKMG
                ********.**::***:***** :******:** :**********************:**

AT5G54230.1     IDPVTHCPRINLLQLSSFLTSSLFKSMSQPMNTPFDLTTSNIN-PDILN-----------
gm034415_Glyma1 IDPVTHTPRLDVLQLASILNTSL------------------YNLPPQFNYPSLSGIGRSV
gm037495_Glyma1 IDPVTHTPRLDHPNSTTLLFLELED--------------QNYN-PDVLNNNQLSG-GSTL
                ****** **::  : :::*  .*                   * *  :*           

AT5G54230.1     ----HLTASLNNVQTESYQPNQ---QLQ---------NDLNTD-QTTFTGLLNSTPPV--
gm034415_Glyma1 INPSHMLT---------FQPNQPHVSLQENHIAKSNSNPLNMESQVMKTKLENHIIPIAT
gm037495_Glyma1 LQNQHQCSRMQLDSTQAFQPNQPQVSLQENHIAKSNSNPLNMEPQVMKTTLENQITPIAT
                    *  :         :****   .**         * ** : *.  * * *   *:  

AT5G54230.1     --QWQNNGEYLGDYHSYTGTGD-PSNNKVP-QAGNYSSAAFVSDHIND-------GENFK
gm034415_Glyma1 LFSHQNTLPNLWLYNSE--------------AMQRFSSPKFNSIYNNNLLENQNLCNNNE
gm037495_Glyma1 PFSQQNTLPNLWHYNTEGHISDLPTMAQSSSAMQCFSSPKFNSIY-NNLLENQNLCNNNE
                  . **.   *  *::                   :**. * * : *:        :* :

AT5G54230.1     AGWNFSSSMLAGTSSSSSTPL----NSSSTFYVNGGSEDDRESFGSDM-LMFHHHHDHNN
gm034415_Glyma1 GAPNFNLSSLLSSTPSSSSPISTLNSSSSATFVNGTTEDERDTYGSNMLLMY-----NIS
gm037495_Glyma1 GMPNFNLSSLLSSTPSSSSPISTLNSSSSTTFVNGTTEDERDTYGSSM-LMY-----NIS
                .  **. * * .::.***:*:    .***: :*** :**:*:::**.* **:     : .

AT5G54230.1     NALNLS---
gm034415_Glyma1 NGLNDSGLL
gm037495_Glyma1 NGLNDSGLL
                *.** *
BoxShade v3.31 C (beta, 970507) Output
AT5G54230.1     M G K S S S S E E S E V K K G P W T P E E D E K L V G Y I Q T H G P G K W R T L P K N A G L K R C G K S C R L R W T N Y
gm034415_Glyma1    M A K - S S S E K N G L K K G P W T P E E D Q K L I D Y I Q K H G H G K W R T L P K N A G L K R C G K S C R L R W A N Y
gm037495_Glyma1    M A K - S S T E K N G L K K G P W T P E E D Q K L I D Y I Q K H G H G K W R T L P K N A G L K R C G K S C R L R W A N Y
 
AT5G54230.1     L R P D I K R G E F S L Q E E E T I I Q L H R L L G N K W S A I A I H L P G R T D N E I K N Y W N T H I K K K L L R M G
gm034415_Glyma1    L R P D I K R G R F S F E E E E A I I Q L H S V L G N K W S T I A A N L P G R T D N E I K N Y W N T H I K K K L L K M G
gm037495_Glyma1    L R P D I K R G R F S F E E E E A I I Q L H S V L G N K W S T I A A N L P G R T D N E I K N Y W N T H I K K K L L K M G
 
AT5G54230.1     I D P V T H C P R I N L L Q L S S F L T S S L F K S M S Q P M N T P F D L T T S N I N - P D I L N - - - - - - - - - - -
gm034415_Glyma1    I D P V T H T P R L D V L Q L A S I L N T S L - - - - - - - - - - - - - - - - - - Y N L P P Q F N Y P S L S G I G R S V
gm037495_Glyma1    I D P V T H T P R L D H P N S T T L L F L E L E D - - - - - - - - - - - - - - Q N Y N - P D V L N N N Q L S G - G S T L
 
AT5G54230.1     - - - - H L T A S L N N V Q T E S Y Q P N Q - - - Q L Q - - - - - - - - - N D L N T D - Q T T F T G L L N S T P P V - -
gm034415_Glyma1    I N P S H M L T - - - - - - - - - F Q P N Q P H V S L Q E N H I A K S N S N P L N M E S Q V M K T K L E N H I I P I A T
gm037495_Glyma1    L Q N Q H Q C S R M Q L D S T Q A F Q P N Q P Q V S L Q E N H I A K S N S N P L N M E P Q V M K T T L E N Q I T P I A T
 
AT5G54230.1     - - Q W Q N N G E Y L G D Y H S Y T G T G D - P S N N K V P - Q A G N Y S S A A F V S D H I N D - - - - - - - G E N F K
gm034415_Glyma1    L F S H Q N T L P N L W L Y N S E - - - - - - - - - - - - - - A M Q R F S S P K F N S I Y N N N L L E N Q N L C N N N E
gm037495_Glyma1    P F S Q Q N T L P N L W H Y N T E G H I S D L P T M A Q S S S A M Q C F S S P K F N S I Y - N N L L E N Q N L C N N N E
 
AT5G54230.1     A G W N F S S S M L A G T S S S S S T P L - - - - N S S S T F Y V N G G S E D D R E S F G S D M - L M F H H H H D H N N
gm034415_Glyma1    G A P N F N L S S L L S S T P S S S S P I S T L N S S S S A T F V N G T T E D E R D T Y G S N M L L M Y - - - - - N I S
gm037495_Glyma1    G M P N F N L S S L L S S T P S S S S P I S T L N S S S S T T F V N G T T E D E R D T Y G S S M - L M Y - - - - - N I S
 
AT5G54230.1     N A L N L S - - -
gm034415_Glyma1    N G L N D S G L L
gm037495_Glyma1    N G L N D S G L L
 
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