fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54470.1 VVKRTRLDLDLNLSDE at 155/215 in AT5G54470.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030563 not found in 379aa AT5G54470.1 1st_1st 0.327272727 Ib
Pp006212 not found in 377aa AT5G54470.1 1st_1st 0.293939393 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G54470.1     MGKKK--CELC-----------------CGVARMYCESDQASLCWDCDGKVHGANFLVAK
pp006212_Pp1s22 MARTNTACELC-----------------DGVAALYCEADEAHICWICDAKVHSANFLVAR
Sb030563_Sorbi1 LASSSTPVTCCLPQVKSFRPMPALEQFLAGVPLPDCADPELK-------KSEGDLFL---
                :. ..     *                  **.   *   :         * ..  **   

AT5G54470.1     HMRCLLCSACQSHTPWKASGLNLGPT---------VSIC---------------------
pp006212_Pp1s22 HTRSVLCGTCGTQTSWRASGANPTPL---------PGVCAECSQGEAQGECITLNDGNVI
Sb030563_Sorbi1 ---------------WREEARNRPPFREEVASSLRPPWCA--------------------
                               *: .. *  *             *                     

AT5G54470.1     -------ESC------------LARKKNNN-SSLAGRDQNLNQEEEIIGCNDGAESYDEE
pp006212_Pp1s22 DTARVTAESCESAVIFETEFSQVSSCESSH-SQLSSYD----SEGVIVDCGSAHASVSSG
Sb030563_Sorbi1 DDKWWHRPGC------EVEHGMFSFAQSAALAPLAGASRLLLDVELATGGGVASASSVHG
                        .*            .:  :.   : *:. .    .     . . .  *    

AT5G54470.1     SDEDEEEEEVENQVVPAAVEQELPV----------------------VSSSSSVSS----
pp006212_Pp1s22 ISKSLKRKRSLHSLLPVSVPQSKQIAMRVLEDVNSSDAHRQCKCDSTTSSSSSTGSNSRA
Sb030563_Sorbi1 T--------TWFSPSPSSSSSS------------------------SSSSSSTTTSSSSS
                            .  * :  ..                          ****:. *    

AT5G54470.1     -------------------GEGDQVV------------KRTRLD----------------
pp006212_Pp1s22 NQDSSFEERGDNRTQFPEFGNTNRVVTN----HLLSSAKRQRMDDRVQTMSSFAPAQESA
Sb030563_Sorbi1 PPSSSW-----SSSSWPRPSPAPPISSSPPPTPTAPGPRRTQRSQREAVGPRRGPAARHG
                                   .    :             :* : .                

AT5G54470.1     ---------------LDLNLSDEENQSRPLK---RLSR----------------------
pp006212_Pp1s22 VLSISRSMRTLAKWHWDLHLSSPGTVPLALRMFCKVSRALTPTLFSNSGRRVALAACLRL
Sb030563_Sorbi1 VGRAQPRHRSARAW--------------------RATRKLAP------------------
                                                  : :*                      

AT5G54470.1     ----DE---------------GLSRSTVVMNS---SIVKLHGGRRKAEGCDTSSSSSFY-
pp006212_Pp1s22 AAVLDEAQITVPNSGKVAACAGVSARRLAMTE--LHLLALLGSRRLPVWASSRT------
Sb030563_Sorbi1 -----------------CTCASQPQQSVASSAPQYTLAAAPHSSHAPPGPAPAPPLSFPP
                                     . .   :. .     :     . : .    . .      

AT5G54470.1     -------
pp006212_Pp1s22 -------
Sb030563_Sorbi1 SPAAAED
BoxShade v3.31 C (beta, 970507) Output
AT5G54470.1     M G K K K - - C E L C - - - - - - - - - - - - - - - - - C G V A R M Y C E S D Q A S L C W D C D G K V H G A N F L V A K
pp006212_Pp1s22    M A R T N T A C E L C - - - - - - - - - - - - - - - - - D G V A A L Y C E A D E A H I C W I C D A K V H S A N F L V A R
Sb030563_Sorbi1    L A S S S T P V T C C L P Q V K S F R P M P A L E Q F L A G V P L P D C A D P E L K - - - - - - - K S E G D L F L - - -
 
AT5G54470.1     H M R C L L C S A C Q S H T P W K A S G L N L G P T - - - - - - - - - V S I C - - - - - - - - - - - - - - - - - - - - -
pp006212_Pp1s22    H T R S V L C G T C G T Q T S W R A S G A N P T P L - - - - - - - - - P G V C A E C S Q G E A Q G E C I T L N D G N V I
Sb030563_Sorbi1    - - - - - - - - - - - - - - - W R E E A R N R P P F R E E V A S S L R P P W C A - - - - - - - - - - - - - - - - - - - -
 
AT5G54470.1     - - - - - - - E S C - - - - - - - - - - - - L A R K K N N N - S S L A G R D Q N L N Q E E E I I G C N D G A E S Y D E E
pp006212_Pp1s22    D T A R V T A E S C E S A V I F E T E F S Q V S S C E S S H - S Q L S S Y D - - - - S E G V I V D C G S A H A S V S S G
Sb030563_Sorbi1    D D K W W H R P G C - - - - - - E V E H G M F S F A Q S A A L A P L A G A S R L L L D V E L A T G G G V A S A S S V H G
 
AT5G54470.1     S D E D E E E E E V E N Q V V P A A V E Q E L P V - - - - - - - - - - - - - - - - - - - - - - V S S S S S V S S - - - -
pp006212_Pp1s22    I S K S L K R K R S L H S L L P V S V P Q S K Q I A M R V L E D V N S S D A H R Q C K C D S T T S S S S S T G S N S R A
Sb030563_Sorbi1    T - - - - - - - - T W F S P S P S S S S S S - - - - - - - - - - - - - - - - - - - - - - - - S S S S S S T T T S S S S S
 
AT5G54470.1     - - - - - - - - - - - - - - - - - - - G E G D Q V V - - - - - - - - - - - - K R T R L D - - - - - - - - - - - - - - - -
pp006212_Pp1s22    N Q D S S F E E R G D N R T Q F P E F G N T N R V V T N - - - - H L L S S A K R Q R M D D R V Q T M S S F A P A Q E S A
Sb030563_Sorbi1    P P S S S W - - - - - S S S S W P R P S P A P P I S S S P P P T P T A P G P R R T Q R S Q R E A V G P R R G P A A R H G
 
AT5G54470.1     - - - - - - - - - - - - - - - L D L N L S D E E N Q S R P L K - - - R L S R - - - - - - - - - - - - - - - - - - - - - -
pp006212_Pp1s22    V L S I S R S M R T L A K W H W D L H L S S P G T V P L A L R M F C K V S R A L T P T L F S N S G R R V A L A A C L R L
Sb030563_Sorbi1    V G R A Q P R H R S A R A W - - - - - - - - - - - - - - - - - - - - R A T R K L A P - - - - - - - - - - - - - - - - - -
 
AT5G54470.1     - - - - D E - - - - - - - - - - - - - - - G L S R S T V V M N S - - - S I V K L H G G R R K A E G C D T S S S S S F Y -
pp006212_Pp1s22    A A V L D E A Q I T V P N S G K V A A C A G V S A R R L A M T E - - L H L L A L L G S R R L P V W A S S R T - - - - - -
Sb030563_Sorbi1    - - - - - - - - - - - - - - - - - C T C A S Q P Q Q S V A S S A P Q Y T L A A A P H S S H A P P G P A P A P P L S F P P
 
AT5G54470.1     - - - - - - -
pp006212_Pp1s22    - - - - - - -
Sb030563_Sorbi1    S P A A A E D
 
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