fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54470.1 VVKRTRLDLDLNLSDE at 155/215 in AT5G54470.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030563 not found in 379aa AT5G54470.1 1st_1st 0.327272727 Ib
Pt030794 not found in 285aa AT5G54470.1 1st_1st 0.4 Ia
Pp006212 not found in 377aa AT5G54470.1 1st_1st 0.293939393 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G54470.1     --MGKKKCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSA----CQSH
Sb030563_Sorbi1 ---------LASSSTPVTC----------CLPQVKS--FRPMPALEQFLAGVPLPDCADP
pp006212_Pp1s22 MARTNTACELCDGVAALYCEADEAHICWICDAKVHSANFLVARHTRSVLCGT----CGTQ
pt030794_POPTR_ ----MKGCELCGSSARMFCESDQASLCWDCDEKVHSANFLVAKHCRTLLCQV----CQSP
                         *. . : : *          *  :*:.  *      . .*. .    *   

AT5G54470.1     TPWKASGLNLGPTVSICESCLARKKNNNSSLAGRDQNLN-----QEEEIIGCNDG-----
Sb030563_Sorbi1 ELKKSEG-----------------------------DLFLWREEARNRPPFREEV-----
pp006212_Pp1s22 TSWRASGANPTPLPGVCAEC--------------------SQGEAQGECITLNDGNVIDT
pt030794_POPTR_ TPWKSSGSKLAPTVSVCESCFAVHKNNKKQL----QDLNVMASDQESREAG-NDY-----
                   ::.*                                      . .    ::      

AT5G54470.1     ----AES---------------YDEESDEDEEEEEVENQVVP-----AAVEQEL--PVVS
Sb030563_Sorbi1 ----ASSLRPPWCADDKWWHRPGCE---------------VEHGMFSFAQSAALA-PLAG
pp006212_Pp1s22 ARVTAESCESAVIFETEFSQVSSCESSHSQLSSYDSEGVIVDCGSAHASVSSGISKSLKR
pt030794_POPTR_ ----DESEN-----DREFDDDDTDDDSDEYDEEEDGDNQVVPWSGLTASSSPSIAPPVAS
                     .*                 :               *       : .  :  .:  

AT5G54470.1     SSSS-----VSSGEGDQVVKRTR---LDLDLN------------------LSDEE----N
Sb030563_Sorbi1 ASRL--LLDVELATGGGVA-----SASSVHGTTWFSPSPSSSSSS---SSSSSSTTTS-S
pp006212_Pp1s22 KRSLHSLLPVSVPQSKQIAMRVL---EDVNSSDAHRQCKCDST-----TSSSSSTG---S
pt030794_POPTR_ SSSSEE--EISCAGGNGFLKRMRDSNVDLDSDD---ETGCSSSHNLRGGSMSTEEGNSLS
                         :.   .  .         .:.                     * .     .

AT5G54470.1     QSRPLKR------LSRD----------------------------------EGLS-----
Sb030563_Sorbi1 SSSPPSSSWSS----------------------------SSWPRPSP---APPISSSPPP
pp006212_Pp1s22 NSRANQDSS----FEERGDNRTQFPEFGNTNRVVTNHLLSSAKRQRMDDRVQTMSSFAPA
pt030794_POPTR_ SSRPWKQARTSVHVEEDGHD------------------------------GQAMS-----
                .* . .                                               :*     

AT5G54470.1     RSTVVMN-----SSIVKLH--------------------------------GGRRKAEG-
Sb030563_Sorbi1 TPTAPGP-----RRTQRSQREA--VGPRRGPAARH---GVGRA-QPRHRSARAWRATRKL
pp006212_Pp1s22 QESAVLSISRSMRTLAKWHWDLHLSSPGTVPLALRMFCKVSRALTPTLFSNSGRRVALAA
pt030794_POPTR_ RSSAIID------SLKRLQKDL---------------------------VANGENASAAI
                  :.            : :                                 . . :   

AT5G54470.1     -----------------------CDTSSSSS-----------------------------
Sb030563_Sorbi1 ----------APCT---------CASQPQQSVASSAPQYTLAAAPHSSHAPPGPAPAPPL
pp006212_Pp1s22 CLRLAAVLDEAQITVPNSGKVAACAGVSARRLAMT--ELHLLALLGSRRLPV---WASSR
pt030794_POPTR_ --------------------LGICKLSRDQSLC----------------LPP---PPPPL
                                       *                                    

AT5G54470.1     -FY--------
Sb030563_Sorbi1 SFPPSPAAAED
pp006212_Pp1s22 T----------
pt030794_POPTR_ TFFI-------
BoxShade v3.31 C (beta, 970507) Output
AT5G54470.1     - - M G K K K C E L C C G V A R M Y C E S D Q A S L C W D C D G K V H G A N F L V A K H M R C L L C S A - - - - C Q S H
Sb030563_Sorbi1    - - - - - - - - - L A S S S T P V T C - - - - - - - - - - C L P Q V K S - - F R P M P A L E Q F L A G V P L P D C A D P
pp006212_Pp1s22    M A R T N T A C E L C D G V A A L Y C E A D E A H I C W I C D A K V H S A N F L V A R H T R S V L C G T - - - - C G T Q
pt030794_POPTR_    - - - - M K G C E L C G S S A R M F C E S D Q A S L C W D C D E K V H S A N F L V A K H C R T L L C Q V - - - - C Q S P
 
AT5G54470.1     T P W K A S G L N L G P T V S I C E S C L A R K K N N N S S L A G R D Q N L N - - - - - Q E E E I I G C N D G - - - - -
Sb030563_Sorbi1    E L K K S E G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D L F L W R E E A R N R P P F R E E V - - - - -
pp006212_Pp1s22    T S W R A S G A N P T P L P G V C A E C - - - - - - - - - - - - - - - - - - - - S Q G E A Q G E C I T L N D G N V I D T
pt030794_POPTR_    T P W K S S G S K L A P T V S V C E S C F A V H K N N K K Q L - - - - Q D L N V M A S D Q E S R E A G - N D Y - - - - -
 
AT5G54470.1     - - - - A E S - - - - - - - - - - - - - - - Y D E E S D E D E E E E E V E N Q V V P - - - - - A A V E Q E L - - P V V S
Sb030563_Sorbi1    - - - - A S S L R P P W C A D D K W W H R P G C E - - - - - - - - - - - - - - - V E H G M F S F A Q S A A L A - P L A G
pp006212_Pp1s22    A R V T A E S C E S A V I F E T E F S Q V S S C E S S H S Q L S S Y D S E G V I V D C G S A H A S V S S G I S K S L K R
pt030794_POPTR_    - - - - D E S E N - - - - - D R E F D D D D T D D D S D E Y D E E E D G D N Q V V P W S G L T A S S S P S I A P P V A S
 
AT5G54470.1     S S S S - - - - - V S S G E G D Q V V K R T R - - - L D L D L N - - - - - - - - - - - - - - - - - - L S D E E - - - - N
Sb030563_Sorbi1    A S R L - - L L D V E L A T G G G V A - - - - - S A S S V H G T T W F S P S P S S S S S S - - - S S S S S S T T T S - S
pp006212_Pp1s22    K R S L H S L L P V S V P Q S K Q I A M R V L - - - E D V N S S D A H R Q C K C D S T - - - - - T S S S S S T G - - - S
pt030794_POPTR_    S S S S E E - - E I S C A G G N G F L K R M R D S N V D L D S D D - - - E T G C S S S H N L R G G S M S T E E G N S L S
 
AT5G54470.1     Q S R P L K R - - - - - - L S R D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E G L S - - - - -
Sb030563_Sorbi1    S S S P P S S S W S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S W P R P S P - - - A P P I S S S P P P
pp006212_Pp1s22    N S R A N Q D S S - - - - F E E R G D N R T Q F P E F G N T N R V V T N H L L S S A K R Q R M D D R V Q T M S S F A P A
pt030794_POPTR_    S S R P W K Q A R T S V H V E E D G H D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G Q A M S - - - - -
 
AT5G54470.1     R S T V V M N - - - - - S S I V K L H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G G R R K A E G -
Sb030563_Sorbi1    T P T A P G P - - - - - R R T Q R S Q R E A - - V G P R R G P A A R H - - - G V G R A - Q P R H R S A R A W R A T R K L
pp006212_Pp1s22    Q E S A V L S I S R S M R T L A K W H W D L H L S S P G T V P L A L R M F C K V S R A L T P T L F S N S G R R V A L A A
pt030794_POPTR_    R S S A I I D - - - - - - S L K R L Q K D L - - - - - - - - - - - - - - - - - - - - - - - - - - - V A N G E N A S A A I
 
AT5G54470.1     - - - - - - - - - - - - - - - - - - - - - - - C D T S S S S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030563_Sorbi1    - - - - - - - - - - A P C T - - - - - - - - - C A S Q P Q Q S V A S S A P Q Y T L A A A P H S S H A P P G P A P A P P L
pp006212_Pp1s22    C L R L A A V L D E A Q I T V P N S G K V A A C A G V S A R R L A M T - - E L H L L A L L G S R R L P V - - - W A S S R
pt030794_POPTR_    - - - - - - - - - - - - - - - - - - - - L G I C K L S R D Q S L C - - - - - - - - - - - - - - - - L P P - - - P P P P L
 
AT5G54470.1     - F Y - - - - - - - -
Sb030563_Sorbi1    S F P P S P A A A E D
pp006212_Pp1s22    T - - - - - - - - - -
pt030794_POPTR_    T F F I - - - - - - -
 
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