fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54470.1 VVKRTRLDLDLNLSDE at 155/215 in AT5G54470.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030794 not found in 285aa AT5G54470.1 1st_1st 0.4 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G54470.1     MGKKKCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKAS
pt030794_POPTR_ --MKGCELCGSSARMFCESDQASLCWDCDEKVHSANFLVAKHCRTLLCQVCQSPTPWKSS
                   * **** . ***:************* ***.******** * ***..*** ****:*

AT5G54470.1     GLNLGPTVSICESCLARKKNNNSSLAGRDQNLN-----QEEEIIGCNDGAES--------
pt030794_POPTR_ GSKLAPTVSVCESCFAVHKNNKKQL----QDLNVMASDQESREAG-NDYDESENDREFDD
                * :*.****:****:* :***:..*    *:**     **..  * **  **        

AT5G54470.1     --YDEESDEDEEEEEVENQVVP-----AAVEQEL--PVVSSSSS---VSSGEGDQVVKRT
pt030794_POPTR_ DDTDDDSDEYDEEEDGDNQVVPWSGLTASSSPSIAPPVASSSSSEEEISCAGGNGFLKRM
                   *::*** :***: :*****     *: . .:  **.*****   :*.. *: .:** 

AT5G54470.1     R---LDLDLN---------------LSDEE----NQSRPLKR------LSRD----EGLS
pt030794_POPTR_ RDSNVDLDSDDETGCSSSHNLRGGSMSTEEGNSLSSSRPWKQARTSVHVEEDGHDGQAMS
                *   :*** :               :* **    ..*** *:      :..*    :.:*

AT5G54470.1     RSTVVMNSSIVKLH-----GGRRKAEG----CDTSSSSS-----------FY-
pt030794_POPTR_ RSSAIID-SLKRLQKDLVANGENASAAILGICKLSRDQSLCLPPPPPPLTFFI
                **:.::: *: :*:     .*.. : .    *. * ..*           *:
BoxShade v3.31 C (beta, 970507) Output
AT5G54470.1     M G K K K C E L C C G V A R M Y C E S D Q A S L C W D C D G K V H G A N F L V A K H M R C L L C S A C Q S H T P W K A S
pt030794_POPTR_    - - M K G C E L C G S S A R M F C E S D Q A S L C W D C D E K V H S A N F L V A K H C R T L L C Q V C Q S P T P W K S S
 
AT5G54470.1     G L N L G P T V S I C E S C L A R K K N N N S S L A G R D Q N L N - - - - - Q E E E I I G C N D G A E S - - - - - - - -
pt030794_POPTR_    G S K L A P T V S V C E S C F A V H K N N K K Q L - - - - Q D L N V M A S D Q E S R E A G - N D Y D E S E N D R E F D D
 
AT5G54470.1     - - Y D E E S D E D E E E E E V E N Q V V P - - - - - A A V E Q E L - - P V V S S S S S - - - V S S G E G D Q V V K R T
pt030794_POPTR_    D D T D D D S D E Y D E E E D G D N Q V V P W S G L T A S S S P S I A P P V A S S S S S E E E I S C A G G N G F L K R M
 
AT5G54470.1     R - - - L D L D L N - - - - - - - - - - - - - - - L S D E E - - - - N Q S R P L K R - - - - - - L S R D - - - - E G L S
pt030794_POPTR_    R D S N V D L D S D D E T G C S S S H N L R G G S M S T E E G N S L S S S R P W K Q A R T S V H V E E D G H D G Q A M S
 
AT5G54470.1     R S T V V M N S S I V K L H - - - - - G G R R K A E G - - - - C D T S S S S S - - - - - - - - - - - F Y -
pt030794_POPTR_    R S S A I I D - S L K R L Q K D L V A N G E N A S A A I L G I C K L S R D Q S L C L P P P P P P L T F F I
 
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