Input
| Putative repression domain
|
|
AT5G54470.1 |
VVKRTRLDLDLNLSDE at 155/215 in AT5G54470.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Sb030563 |
not found in 379aa |
AT5G54470.1 |
1st_1st |
0.327272727 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G54470.1 MGKKKCELCCGVARMYCESDQASL-----------CWDCD-GKVHGANFL----------
Sb030563_Sorbi1 LASSSTPVTCCLPQVKSFRPMPALEQFLAGVPLPDCADPELKKSEGDLFLWREEARNRPP
:.... : * :.:: . .:* * * : * .* **
AT5G54470.1 ----VAKHMRCLLCSACQSHTPWKASGLNLGPTVSICE-----------SCLARKKNNNS
Sb030563_Sorbi1 FREEVASSLRPPWCA---DDKWWHRPG---------CEVEHGMFSFAQSAALA-------
**. :* *: ... *: .* ** :.**
AT5G54470.1 SLAGRDQNLNQEEEIIGCNDGAESYDEESDEDEEEEEVENQVVPAAVEQELPVVSSSSSV
Sb030563_Sorbi1 PLAGASRLLLDVELATG--GGVASASSVHGTTWFSPSPSSSSSSSSSSSSTTTSSSSSPP
.*** .: * : * * .*. * .. . . . ... .:: ... .. ****.
AT5G54470.1 SSGEGDQVVKRTRLDLDLNLSDEENQSRPLKRLSRDEGLSRSTVVMNSSIVKLHG-GR--
Sb030563_Sorbi1 SSSWSSSSWPRPSPAPPISSSPPPTPTAPGPR--RTQRSQREAVGPRRGPAARHGVGRAQ
**. ... *. :. * . : * * * : .*.:* . . . ** **
AT5G54470.1 ------------RKAEGC--------DTSSSSSFY-------------------------
Sb030563_Sorbi1 PRHRSARAWRATRKLAPCTCASQPQQSVASSAPQYTLAAAPHSSHAPPGPAPAPPLSFPP
** * ..:**:. *
AT5G54470.1 -------
Sb030563_Sorbi1 SPAAAED
BoxShade v3.31 C (beta, 970507) Output
AT5G54470.1 |
M |
G |
K |
K |
K |
C |
E |
L |
C |
C |
G |
V |
A |
R |
M |
Y |
C |
E |
S |
D |
Q |
A |
S |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
C |
W |
D |
C |
D |
- |
G |
K |
V |
H |
G |
A |
N |
F |
L |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
Sb030563_Sorbi1 |
L |
A |
S |
S |
S |
T |
P |
V |
T |
C |
C |
L |
P |
Q |
V |
K |
S |
F |
R |
P |
M |
P |
A |
L |
E |
Q |
F |
L |
A |
G |
V |
P |
L |
P |
D |
C |
A |
D |
P |
E |
L |
K |
K |
S |
E |
G |
D |
L |
F |
L |
W |
R |
E |
E |
A |
R |
N |
R |
P |
P |
|
AT5G54470.1 |
- |
- |
- |
- |
V |
A |
K |
H |
M |
R |
C |
L |
L |
C |
S |
A |
C |
Q |
S |
H |
T |
P |
W |
K |
A |
S |
G |
L |
N |
L |
G |
P |
T |
V |
S |
I |
C |
E |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
C |
L |
A |
R |
K |
K |
N |
N |
N |
S |
Sb030563_Sorbi1 |
F |
R |
E |
E |
V |
A |
S |
S |
L |
R |
P |
P |
W |
C |
A |
- |
- |
- |
D |
D |
K |
W |
W |
H |
R |
P |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
C |
E |
V |
E |
H |
G |
M |
F |
S |
F |
A |
Q |
S |
A |
A |
L |
A |
- |
- |
- |
- |
- |
- |
- |
|
AT5G54470.1 |
S |
L |
A |
G |
R |
D |
Q |
N |
L |
N |
Q |
E |
E |
E |
I |
I |
G |
C |
N |
D |
G |
A |
E |
S |
Y |
D |
E |
E |
S |
D |
E |
D |
E |
E |
E |
E |
E |
V |
E |
N |
Q |
V |
V |
P |
A |
A |
V |
E |
Q |
E |
L |
P |
V |
V |
S |
S |
S |
S |
S |
V |
Sb030563_Sorbi1 |
P |
L |
A |
G |
A |
S |
R |
L |
L |
L |
D |
V |
E |
L |
A |
T |
G |
- |
- |
G |
G |
V |
A |
S |
A |
S |
S |
V |
H |
G |
T |
T |
W |
F |
S |
P |
S |
P |
S |
S |
S |
S |
S |
S |
S |
S |
S |
S |
S |
S |
T |
T |
T |
S |
S |
S |
S |
S |
P |
P |
|
AT5G54470.1 |
S |
S |
G |
E |
G |
D |
Q |
V |
V |
K |
R |
T |
R |
L |
D |
L |
D |
L |
N |
L |
S |
D |
E |
E |
N |
Q |
S |
R |
P |
L |
K |
R |
L |
S |
R |
D |
E |
G |
L |
S |
R |
S |
T |
V |
V |
M |
N |
S |
S |
I |
V |
K |
L |
H |
G |
- |
G |
R |
- |
- |
Sb030563_Sorbi1 |
S |
S |
S |
W |
S |
S |
S |
S |
W |
P |
R |
P |
S |
P |
A |
P |
P |
I |
S |
S |
S |
P |
P |
P |
T |
P |
T |
A |
P |
G |
P |
R |
- |
- |
R |
T |
Q |
R |
S |
Q |
R |
E |
A |
V |
G |
P |
R |
R |
G |
P |
A |
A |
R |
H |
G |
V |
G |
R |
A |
Q |
|
AT5G54470.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
R |
K |
A |
E |
G |
C |
- |
- |
- |
- |
- |
- |
- |
- |
D |
T |
S |
S |
S |
S |
S |
F |
Y |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
Sb030563_Sorbi1 |
P |
R |
H |
R |
S |
A |
R |
A |
W |
R |
A |
T |
R |
K |
L |
A |
P |
C |
T |
C |
A |
S |
Q |
P |
Q |
Q |
S |
V |
A |
S |
S |
A |
P |
Q |
Y |
T |
L |
A |
A |
A |
P |
H |
S |
S |
H |
A |
P |
P |
G |
P |
A |
P |
A |
P |
P |
L |
S |
F |
P |
P |
|
AT5G54470.1 |
- |
- |
- |
- |
- |
- |
- |
Sb030563_Sorbi1 |
S |
P |
A |
A |
A |
E |
D |
|
|