fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54630.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019524 not found in 386aa AT4G27240.1 not_not 0.476543209 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G54630.1     MEDSSKKSQKKKKNKSKNNIPT-VWFSLKKSLHCKSEPSDVHDPISTTKQQQHLSTISTK
pt019524_POPTR_ -------------------MPSKFWFSVKKSLKCELKPSDVHDP----RAKSDLSNIQTR
                                   :*: .***:****:*: :*******    : :..**.*.*:

AT5G54630.1     KISGISSGGAAVCGGGLSGCSRSIANLKDVIHGSKRHFEKPPISSPRSIGSNEFLNPITH
pt019524_POPTR_ --NSIK-----------SGCSRSLSNLREIIHGSTRYTEKPLTSSPRSLESTDFLNSIAH
                  ..*.           ******::**:::****.*: ***  *****: *.:***.*:*

AT5G54630.1     EVILSNSTCELKITGVG---DMASPVGAADSGGGGGGGNGRSTTYVGMLRPGTPMHYLNH
pt019524_POPTR_ EVVLCDTKCELKITG-GRGHDIVSP--------------RRSCSYSRKKHGDSPI-YCN-
                **:*.::.******* *   *:.**               ** :*    : .:*: * * 

AT5G54630.1     SASYRSQTRKGSFALSERDRGGGGGGEGLGFHTNRRVSLEMNRESTINGGNNSSVSCHKC
pt019524_POPTR_ -------------------------GNG--------VSSKPKSSHDADSYGSPSLVCKKC
                                         *:*        ** : : .   :. ...*: *:**

AT5G54630.1     GEQFNKLEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIDRVLKVHNM
pt019524_POPTR_ HAKFKELDAFEAHHLSNHAVTELVEGNSSRRIVELICRTRWLQSENNCVTIERVLKVHNM
                  :*::*:* ******:*********:***:***:**** **:***:*  *:********

AT5G54630.1     QKTLARFEEYRETVKIRASKLQKKHPRCLADGNELLRFHGTTVACGLGINGSTSVCTAEK
pt019524_POPTR_ QMTLVQFEEHREMVKIKASKLPTKHSRCLADGNELLRFHGTTVACSLGLNGSSSLCRMEK
                * **.:***:** ***:**** .**.*******************.**:***:*:*  **

AT5G54630.1     CCVCRIIRNGFSSKREKNNGVGVFTASTSGRAFESILVNGGDESGDVDRTVRKVLIVCRV
pt019524_POPTR_ CGVCQILRHGFTDKDVNGIGVGIFTTSTSGRALESVEVSQDNQD------VRKALLLCRV
                * **:*:*:**:.*  :. ***:**:******:**: *. .::.      ***.*::***

AT5G54630.1     IAGRVHRPVENVEEMNGLMSGFDSLAGKVGLYTN-VEELYLLNPKALLPCFVVICKP--
pt019524_POPTR_ IAGRVHRPLENVQEIAG-QSGFDSLAGKAGQNSHLLEELYLLNPKALLPCFVVTCNHEC
                ********:***:*: *  *********.*  :: :***************** *:
BoxShade v3.31 C (beta, 970507) Output
AT5G54630.1     M E D S S K K S Q K K K K N K S K N N I P T - V W F S L K K S L H C K S E P S D V H D P I S T T K Q Q Q H L S T I S T K
pt019524_POPTR_    - - - - - - - - - - - - - - - - - - - M P S K F W F S V K K S L K C E L K P S D V H D P - - - - R A K S D L S N I Q T R
 
AT5G54630.1     K I S G I S S G G A A V C G G G L S G C S R S I A N L K D V I H G S K R H F E K P P I S S P R S I G S N E F L N P I T H
pt019524_POPTR_    - - N S I K - - - - - - - - - - - S G C S R S L S N L R E I I H G S T R Y T E K P L T S S P R S L E S T D F L N S I A H
 
AT5G54630.1     E V I L S N S T C E L K I T G V G - - - D M A S P V G A A D S G G G G G G G N G R S T T Y V G M L R P G T P M H Y L N H
pt019524_POPTR_    E V V L C D T K C E L K I T G - G R G H D I V S P - - - - - - - - - - - - - - R R S C S Y S R K K H G D S P I - Y C N -
 
AT5G54630.1     S A S Y R S Q T R K G S F A L S E R D R G G G G G G E G L G F H T N R R V S L E M N R E S T I N G G N N S S V S C H K C
pt019524_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - G N G - - - - - - - - V S S K P K S S H D A D S Y G S P S L V C K K C
 
AT5G54630.1     G E Q F N K L E A A E A H H L S K H A V T E L V E G D S S R K I V E I I C R T S W L K S E N Q C G R I D R V L K V H N M
pt019524_POPTR_    H A K F K E L D A F E A H H L S N H A V T E L V E G N S S R R I V E L I C R T R W L Q S E N N C V T I E R V L K V H N M
 
AT5G54630.1     Q K T L A R F E E Y R E T V K I R A S K L Q K K H P R C L A D G N E L L R F H G T T V A C G L G I N G S T S V C T A E K
pt019524_POPTR_    Q M T L V Q F E E H R E M V K I K A S K L P T K H S R C L A D G N E L L R F H G T T V A C S L G L N G S S S L C R M E K
 
AT5G54630.1     C C V C R I I R N G F S S K R E K N N G V G V F T A S T S G R A F E S I L V N G G D E S G D V D R T V R K V L I V C R V
pt019524_POPTR_    C G V C Q I L R H G F T D K D V N G I G V G I F T T S T S G R A L E S V E V S Q D N Q D - - - - - - V R K A L L L C R V
 
AT5G54630.1     I A G R V H R P V E N V E E M N G L M S G F D S L A G K V G L Y T N - V E E L Y L L N P K A L L P C F V V I C K P - -
pt019524_POPTR_    I A G R V H R P L E N V Q E I A G - Q S G F D S L A G K A G Q N S H L L E E L Y L L N P K A L L P C F V V T C N H E C
 
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