fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54630.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031001 not found in 440aa AT5G54630.1 1st_1st 0.667901234 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G54630.1     MEDSSKKSQKKKKNKSKNNIPTVWFSLKKSLHCKSEPSDVHDPISTTKQQQHLSTISTKK
pt031001_POPTR_ -------------------MPTVWFSLKRSLHCKSEPSEVHDPKST----KHMSTILTRK
                                   :********:*********:**** **    :*:*** *:*

AT5G54630.1     ISGISSGGAAVCGGGLSGCSRSIANLKDVIHGSKRHFEKPPISSPRSIGSNEFLNPITHE
pt031001_POPTR_ -------------AGRSGCSRSIANLKDVIHGSKRHMEKPPSCSPRSIGSSDFLNPLTHE
                             .* ********************:**** .*******.:****:***

AT5G54630.1     VILSNSTCELKITGVGDMASPVGAA------DSGGGGGGGNGR-STTYVGMLRPGTP---
pt031001_POPTR_ VILSNSRCELKITGFGGFQEGVGSGVISHGNSHNGASGGSNGAVGSTFVGTLRQGTPGPG
                ****** *******.*.: . **:.      . .*..**.**  .:*:** ** ***   

AT5G54630.1     ----MHYLNHSA-SYRSQTRKGSFALSERDRGGGGGGE--GLGFHTNRRVSLEMNRESTI
pt031001_POPTR_ GHPTMHYFNPSIRNTATPPRKSHFLLSDREAPGFGGSGIFGAGGHSSSRVSL----ETKF
                    ***:* *  .  : .**. * **:*:  * **.   * * *:. ****    *:.:

AT5G54630.1     NGGNNSSVSCHKCGEQFNKLEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQ
pt031001_POPTR_ NG--SSTLTCHKCGEQFNKWEAAENHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENH
                **  .*:::********** **** **********************************:

AT5G54630.1     CGRIDRVLKVHNMQKTLARFEEYRETVKIRASKLQKKHPRCLADGNELLRFHGTTVACGL
pt031001_POPTR_ CGRIERVLKVHSMQKTLARFEEYREMVKIKASKLPKKHPRCIADGNELLRFYGTTVACSL
                ****:******.************* ***:**** ******:*********:******.*

AT5G54630.1     GINGSTSVCTAEKCCVCRIIRNGFSSKREKNNGVGVFTASTSGRAFESILVNGGDESGDV
pt031001_POPTR_ GVNGSSSLCVSEKCCVCRIIRNGFSVKKELKGGVGVFTTSTSGRAFECI------EIFED
                *:***:*:*.:************** *:* :.******:********.*      *  : 

AT5G54630.1     DRTVRKVLIVCRVIAGRVHRPVENVEEMNGLMSGFDSLAGKVGLYTNVEELYLLNPKALL
pt031001_POPTR_ DPCIRKALIVCRVIAGRVHRPLENIQEISS-QTGFDSLAGKVGLYSNIEELYLLNPKALL
                *  :**.**************:**::*:..  :************:*:************

AT5G54630.1     PCFVVICKP
pt031001_POPTR_ PCFVVICKS
                ********.
BoxShade v3.31 C (beta, 970507) Output
AT5G54630.1     M E D S S K K S Q K K K K N K S K N N I P T V W F S L K K S L H C K S E P S D V H D P I S T T K Q Q Q H L S T I S T K K
pt031001_POPTR_    - - - - - - - - - - - - - - - - - - - M P T V W F S L K R S L H C K S E P S E V H D P K S T - - - - K H M S T I L T R K
 
AT5G54630.1     I S G I S S G G A A V C G G G L S G C S R S I A N L K D V I H G S K R H F E K P P I S S P R S I G S N E F L N P I T H E
pt031001_POPTR_    - - - - - - - - - - - - - A G R S G C S R S I A N L K D V I H G S K R H M E K P P S C S P R S I G S S D F L N P L T H E
 
AT5G54630.1     V I L S N S T C E L K I T G V G D M A S P V G A A - - - - - - D S G G G G G G G N G R - S T T Y V G M L R P G T P - - -
pt031001_POPTR_    V I L S N S R C E L K I T G F G G F Q E G V G S G V I S H G N S H N G A S G G S N G A V G S T F V G T L R Q G T P G P G
 
AT5G54630.1     - - - - M H Y L N H S A - S Y R S Q T R K G S F A L S E R D R G G G G G G E - - G L G F H T N R R V S L E M N R E S T I
pt031001_POPTR_    G H P T M H Y F N P S I R N T A T P P R K S H F L L S D R E A P G F G G S G I F G A G G H S S S R V S L - - - - E T K F
 
AT5G54630.1     N G G N N S S V S C H K C G E Q F N K L E A A E A H H L S K H A V T E L V E G D S S R K I V E I I C R T S W L K S E N Q
pt031001_POPTR_    N G - - S S T L T C H K C G E Q F N K W E A A E N H H L S K H A V T E L V E G D S S R K I V E I I C R T S W L K S E N H
 
AT5G54630.1     C G R I D R V L K V H N M Q K T L A R F E E Y R E T V K I R A S K L Q K K H P R C L A D G N E L L R F H G T T V A C G L
pt031001_POPTR_    C G R I E R V L K V H S M Q K T L A R F E E Y R E M V K I K A S K L P K K H P R C I A D G N E L L R F Y G T T V A C S L
 
AT5G54630.1     G I N G S T S V C T A E K C C V C R I I R N G F S S K R E K N N G V G V F T A S T S G R A F E S I L V N G G D E S G D V
pt031001_POPTR_    G V N G S S S L C V S E K C C V C R I I R N G F S V K K E L K G G V G V F T T S T S G R A F E C I - - - - - - E I F E D
 
AT5G54630.1     D R T V R K V L I V C R V I A G R V H R P V E N V E E M N G L M S G F D S L A G K V G L Y T N V E E L Y L L N P K A L L
pt031001_POPTR_    D P C I R K A L I V C R V I A G R V H R P L E N I Q E I S S - Q T G F D S L A G K V G L Y S N I E E L Y L L N P K A L L
 
AT5G54630.1     P C F V V I C K P
pt031001_POPTR_    P C F V V I C K S
 
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