fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm041354 not found in 212aa AT1G51070.1 not_not 0.477922077 III
Gm037723 not found in 231aa AT1G51070.1 not_not 0.425974025 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G54680.1     ---MVSPENANWICDLIDADYGS---------FTIQGPGFSWPVQQPI--GVSSNSSAGV
gm037723_Glyma1 MDVNSSGGASDWL-----YDYGFDIPVAGSDFMASDSGGFRWGPQSHNFKG-PSNMSLEM
gm041354_Glyma1 ------MSNSNWV---LDYDYLDNIP-----LTTLEPPNFSWSSSSP-----PPTLSVEL
                         ::*:      **            : :  .* *  ..      ... *  :

AT5G54680.1     DGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKT
gm037723_Glyma1 EYSLDST--VMENGPSKRLRTESC-ASGSKACREKLRRDKLNERFLELSSILEPSRQPKS
gm041354_Glyma1 DDSFGILDGLKENRSRKRLR-----PSDSKACREKMRRDRLNDRFMELGSILDPRKPLKM
                : * .      *  . ** *     .:.******* ***:**::*:**.:**:* .  * 

AT5G54680.1     DKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQ
gm037723_Glyma1 DKVAILSDAARVVIQLRNEAKRLKEMNDELQAKVKELKGEKNELRDEKNRLKEEKEKLEQ
gm041354_Glyma1 DKAVILSDAVRVVSQLREEAQKLRESTENLQEKINALKDEKNELRDEKQRLKVEKENLEQ
                **..** **.*:* *** **::*:: ...** *:: ** *********:*** ***:***

AT5G54680.1     QLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQD
gm037723_Glyma1 QVKVANI-QPSFLPQAP-------DAKGQVGSHKLIPFIGYPGIAMWQFMSPAAVDTSKD
gm041354_Glyma1 KVKALSS-QPSFL-----------AAAGQVVGSKLVPFMGYPGVAMWQFLSPAAVDTSQD
                ::*. .  ****:            * **. . *::*::.***:*****:.**:****:*

AT5G54680.1     HVLRPPVA
gm037723_Glyma1 HLLRPPVA
gm041354_Glyma1 HVLRPPVA
                *:******
BoxShade v3.31 C (beta, 970507) Output
AT5G54680.1     - - - M V S P E N A N W I C D L I D A D Y G S - - - - - - - - - F T I Q G P G F S W P V Q Q P I - - G V S S N S S A G V
gm037723_Glyma1    M D V N S S G G A S D W L - - - - - Y D Y G F D I P V A G S D F M A S D S G G F R W G P Q S H N F K G - P S N M S L E M
gm041354_Glyma1    - - - - - - M S N S N W V - - - L D Y D Y L D N I P - - - - - L T T L E P P N F S W S S S S P - - - - - P P T L S V E L
 
AT5G54680.1     D G S A G N S E A S K E P G S K K R G R C E S S S A T S S K A C R E K Q R R D R L N D K F M E L G A I L E P G N P P K T
gm037723_Glyma1    E Y S L D S T - - V M E N G P S K R L R T E S C - A S G S K A C R E K L R R D K L N E R F L E L S S I L E P S R Q P K S
gm041354_Glyma1    D D S F G I L D G L K E N R S R K R L R - - - - - P S D S K A C R E K M R R D R L N D R F M E L G S I L D P R K P L K M
 
AT5G54680.1     D K A A I L V D A V R M V T Q L R G E A Q K L K D S N S S L Q D K I K E L K T E K N E L R D E K Q R L K T E K E K L E Q
gm037723_Glyma1    D K V A I L S D A A R V V I Q L R N E A K R L K E M N D E L Q A K V K E L K G E K N E L R D E K N R L K E E K E K L E Q
gm041354_Glyma1    D K A V I L S D A V R V V S Q L R E E A Q K L R E S T E N L Q E K I N A L K D E K N E L R D E K Q R L K V E K E N L E Q
 
AT5G54680.1     Q L K A M N A P Q P S F F P A P P M M P T A F A S A Q G Q A P G N K M V P I I S Y P G V A M W Q F M P P A S V D T S Q D
gm037723_Glyma1    Q V K V A N I - Q P S F L P Q A P - - - - - - - D A K G Q V G S H K L I P F I G Y P G I A M W Q F M S P A A V D T S K D
gm041354_Glyma1    K V K A L S S - Q P S F L - - - - - - - - - - - A A A G Q V V G S K L V P F M G Y P G V A M W Q F L S P A A V D T S Q D
 
AT5G54680.1     H V L R P P V A
gm037723_Glyma1    H L L R P P V A
gm041354_Glyma1    H V L R P P V A
 
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