fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os028474 not found in 256aa AT5G54680.1 1st_1st 0.496103896 Ia
Sb023885 not found in 382aa AT5G54680.1 1st_1st 0.454545454 Ia
Gm016330 not found in 236aa AT5G54680.1 1st_1st 0.664935064 Ia
Pt025862 not found in 249aa AT5G54680.1 1st_1st 0.664935064 Ia
Pp001342 not found in 238aa AT5G54680.1 1st_1st 0.485714285 Ia
Sm012527 not found in 339aa AT5G54680.1 1st_1st 0.449350649 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G54680.1     --------------MVSP-ENANWICD--------LIDADYGSFTIQGPGFSWP------
Sm012527_Selmo1 ----------GILAMSSP-QSQKWMA--FLSDTF-L-DEES----QNSSALFW-------
pp001342_Pp1s24 -------------MMSSPSNTSKWMS--YLAENL-LAEEEV----QPSNPFFWC------
Os028474_Os07t0 --------------MASP-EGSTWVFDCPLMDDL-AAAAGFDA--APAGGFYWTTPAPPQ
pt025862_POPTR_ --------------MAST-GNAGWVSDSYFMDDITVHDPNF-------SGFSWPSPSP--
gm016330_Glyma0 --------------MVSR-ENTNWLFDYGLIDDIPVPDATFG---VNSSAFTWP------
Sb023885_Sorbi1 PTPAICRWPRRSPAMASP-EGTTWVFDCPLMDDL-AVAADFAA--APAGGFFWA--APP-
                              * *      *:                         : *       

AT5G54680.1     -----------VQQ---------PIG-VSSNSSAG--VDGSAGNSEASKEPGSKKRGRCE
Sm012527_Selmo1 ----------GSQP-------------SCDPVDCCVENDSSKVDSDEFEKTCPKKRSREE
pp001342_Pp1s24 ----------TTQQ-------------PVEQIDCSIDNECSKGESDVPEKSCSRKRSREE
Os028474_Os07t0 AALQP---PPPQQQ---------PVAPATAAPNACAEINGSV-DCEHGKEQPTNKRPRSE
pt025862_POPTR_ ----------PVQQQQHHQTPFAPVV-TASSPNFGEEIDGSFGDCDVHKEPNSKKRSRSE
gm016330_Glyma0 -----------------------PNA-LNASSNVGVEIDGSLGDSDSLKESGSKKRVRSE
Sb023885_Sorbi1 -SLQPQVVQAPVQS---------VV--AASAPNPCVEISSSV-DCGQGKEQPTNKRPRSE
                                                .     . *  :.   ::  ..** * *

AT5G54680.1     SSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQK
Sm012527_Selmo1 SCGAPGNKACREKMRRDRLNDRFVELSAALEPGRPPKSDKATILSDAVRVITQLRAEAQQ
pp001342_Pp1s24 GSSGSGNKACREKMRRDRLNDRFLDLSAALEPGRPPKTDKATILSDAVRILTQLRAEAQG
Os028474_Os07t0 SGTRPSSKACREKVRRDKLNERFLELGAVLEPGKTPKMDKSSILNDAIRVMAELRSEAQK
pt025862_POPTR_ SCSASSSKACREKLRRDRLNDKFMELGSILDPGRTPKTDKAAILVDAVRIVTQLRGEAQK
gm016330_Glyma0 SCAASGSKACREKLRRDRLNDKFVELGAILEPGRPAKTDKAAILIDAVRMVTQLRGEAQK
Sb023885_Sorbi1 STAEPSTKASREKIRRDKLNERFLELGAILEPGKTPKMDKSAILNDAIRVVGELRSEAKE
                .   ...**.*** ***:**::*::*.: *:**...* **::** **:*:: :**.**: 

AT5G54680.1     LKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAP------
Sm012527_Selmo1 LKESNEQLRDGIKELKAEKNELREEKMRLKSEKDRLEQQLKTMAM-PPSFMPHPAAALHA
pp001342_Pp1s24 LTESNNQLRETIKDLKNEKNELREEKTRLKADKERLEQQVKAMTI-PAGYMPHP-AALH-
Os028474_Os07t0 LKESNESLQEKIKELKAEKNELRDEKQKLKAEKESLEQQIKFLNA-RPSFVPHP------
pt025862_POPTR_ LKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKTMNS-QPSFMPAP------
gm016330_Glyma0 LKDTNQGLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKSLNA-QPSFMPPP------
Sb023885_Sorbi1 LKDSNESLQEKIKELKAEKNELRDEKQRLKAEKESLEQQIKFLNA-RPSLVPHH------
                *.::*. *:: **:** ******:** :**::*: ****:* :    .. .*        

AT5G54680.1     --PMMPT-AFASAQGQA-PGNK------MVPIISYPGVAMWQFMPPASVDTSQDHVLRPP
Sm012527_Selmo1 HHAAAAAAAFH-AQIQA-ASTKTGGASAAGPLPGFPGMAMWQWMPPAVVDTSQDHVLRPP
pp001342_Pp1s24 ----AAVAAFA-AQTQA-ASNK------AAQIAGYPGMAMWQWMPPAAVDTSQDHVLRPP
Os028474_Os07t0 --PVIPASAFTAPQGQA-AGQKL-----MMPVIGYPGFPMWQFMPPSDVDTTDDTKSCPP
pt025862_POPTR_ --PAIPA-AFT-TQGQA-PGNK------LMPFISYPGVAMWQFMPPAAVDTSQDHVLRPP
gm016330_Glyma0 --AAMPA-AFA-AQGQA-HGNK------LVPFISYPGVAMWQFMPPAAVDTSQDHVLRPP
Sb023885_Sorbi1 --PVISASAFTAPQGPAVAGHKL-----MMPVLGYPGFPMWQFMPPSDVDTSDDPKSCPP
                     .. **  .*  *  . *         . .:**..***:***: ***::*    **

AT5G54680.1     VA
Sm012527_Selmo1 VA
pp001342_Pp1s24 VA
Os028474_Os07t0 VA
pt025862_POPTR_ VA
gm016330_Glyma0 VA
Sb023885_Sorbi1 VA
                **
BoxShade v3.31 C (beta, 970507) Output
AT5G54680.1     - - - - - - - - - - - - - - M V S P - E N A N W I C D - - - - - - - - L I D A D Y G S F T I Q G P G F S W P - - - - - -
Sm012527_Selmo1    - - - - - - - - - - G I L A M S S P - Q S Q K W M A - - F L S D T F - L - D E E S - - - - Q N S S A L F W - - - - - - -
pp001342_Pp1s24    - - - - - - - - - - - - - M M S S P S N T S K W M S - - Y L A E N L - L A E E E V - - - - Q P S N P F F W C - - - - - -
Os028474_Os07t0    - - - - - - - - - - - - - - M A S P - E G S T W V F D C P L M D D L - A A A A G F D A - - A P A G G F Y W T T P A P P Q
pt025862_POPTR_    - - - - - - - - - - - - - - M A S T - G N A G W V S D S Y F M D D I T V H D P N F - - - - - - - S G F S W P S P S P - -
gm016330_Glyma0    - - - - - - - - - - - - - - M V S R - E N T N W L F D Y G L I D D I P V P D A T F G - - - V N S S A F T W P - - - - - -
Sb023885_Sorbi1    P T P A I C R W P R R S P A M A S P - E G T T W V F D C P L M D D L - A V A A D F A A - - A P A G G F F W A - - A P P -
 
AT5G54680.1     - - - - - - - - - - - V Q Q - - - - - - - - - P I G - V S S N S S A G - - V D G S A G N S E A S K E P G S K K R G R C E
Sm012527_Selmo1    - - - - - - - - - - G S Q P - - - - - - - - - - - - - S C D P V D C C V E N D S S K V D S D E F E K T C P K K R S R E E
pp001342_Pp1s24    - - - - - - - - - - T T Q Q - - - - - - - - - - - - - P V E Q I D C S I D N E C S K G E S D V P E K S C S R K R S R E E
Os028474_Os07t0    A A L Q P - - - P P P Q Q Q - - - - - - - - - P V A P A T A A P N A C A E I N G S V - D C E H G K E Q P T N K R P R S E
pt025862_POPTR_    - - - - - - - - - - P V Q Q Q Q H H Q T P F A P V V - T A S S P N F G E E I D G S F G D C D V H K E P N S K K R S R S E
gm016330_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - P N A - L N A S S N V G V E I D G S L G D S D S L K E S G S K K R V R S E
Sb023885_Sorbi1    - S L Q P Q V V Q A P V Q S - - - - - - - - - V V - - A A S A P N P C V E I S S S V - D C G Q G K E Q P T N K R P R S E
 
AT5G54680.1     S S S A T S S K A C R E K Q R R D R L N D K F M E L G A I L E P G N P P K T D K A A I L V D A V R M V T Q L R G E A Q K
Sm012527_Selmo1    S C G A P G N K A C R E K M R R D R L N D R F V E L S A A L E P G R P P K S D K A T I L S D A V R V I T Q L R A E A Q Q
pp001342_Pp1s24    G S S G S G N K A C R E K M R R D R L N D R F L D L S A A L E P G R P P K T D K A T I L S D A V R I L T Q L R A E A Q G
Os028474_Os07t0    S G T R P S S K A C R E K V R R D K L N E R F L E L G A V L E P G K T P K M D K S S I L N D A I R V M A E L R S E A Q K
pt025862_POPTR_    S C S A S S S K A C R E K L R R D R L N D K F M E L G S I L D P G R T P K T D K A A I L V D A V R I V T Q L R G E A Q K
gm016330_Glyma0    S C A A S G S K A C R E K L R R D R L N D K F V E L G A I L E P G R P A K T D K A A I L I D A V R M V T Q L R G E A Q K
Sb023885_Sorbi1    S T A E P S T K A S R E K I R R D K L N E R F L E L G A I L E P G K T P K M D K S A I L N D A I R V V G E L R S E A K E
 
AT5G54680.1     L K D S N S S L Q D K I K E L K T E K N E L R D E K Q R L K T E K E K L E Q Q L K A M N A P Q P S F F P A P - - - - - -
Sm012527_Selmo1    L K E S N E Q L R D G I K E L K A E K N E L R E E K M R L K S E K D R L E Q Q L K T M A M - P P S F M P H P A A A L H A
pp001342_Pp1s24    L T E S N N Q L R E T I K D L K N E K N E L R E E K T R L K A D K E R L E Q Q V K A M T I - P A G Y M P H P - A A L H -
Os028474_Os07t0    L K E S N E S L Q E K I K E L K A E K N E L R D E K Q K L K A E K E S L E Q Q I K F L N A - R P S F V P H P - - - - - -
pt025862_POPTR_    L K D S N S S L Q E K I K E L K A E K N E L R D E K Q R L K A E K E K L E Q Q L K T M N S - Q P S F M P A P - - - - - -
gm016330_Glyma0    L K D T N Q G L Q E K I K E L K A E K N E L R D E K Q R L K A E K E K L E Q Q L K S L N A - Q P S F M P P P - - - - - -
Sb023885_Sorbi1    L K D S N E S L Q E K I K E L K A E K N E L R D E K Q R L K A E K E S L E Q Q I K F L N A - R P S L V P H H - - - - - -
 
AT5G54680.1     - - P M M P T - A F A S A Q G Q A - P G N K - - - - - - M V P I I S Y P G V A M W Q F M P P A S V D T S Q D H V L R P P
Sm012527_Selmo1    H H A A A A A A A F H - A Q I Q A - A S T K T G G A S A A G P L P G F P G M A M W Q W M P P A V V D T S Q D H V L R P P
pp001342_Pp1s24    - - - - A A V A A F A - A Q T Q A - A S N K - - - - - - A A Q I A G Y P G M A M W Q W M P P A A V D T S Q D H V L R P P
Os028474_Os07t0    - - P V I P A S A F T A P Q G Q A - A G Q K L - - - - - M M P V I G Y P G F P M W Q F M P P S D V D T T D D T K S C P P
pt025862_POPTR_    - - P A I P A - A F T - T Q G Q A - P G N K - - - - - - L M P F I S Y P G V A M W Q F M P P A A V D T S Q D H V L R P P
gm016330_Glyma0    - - A A M P A - A F A - A Q G Q A - H G N K - - - - - - L V P F I S Y P G V A M W Q F M P P A A V D T S Q D H V L R P P
Sb023885_Sorbi1    - - P V I S A S A F T A P Q G P A V A G H K L - - - - - M M P V L G Y P G F P M W Q F M P P S D V D T S D D P K S C P P
 
AT5G54680.1     V A
Sm012527_Selmo1    V A
pp001342_Pp1s24    V A
Os028474_Os07t0    V A
pt025862_POPTR_    V A
gm016330_Glyma0    V A
Sb023885_Sorbi1    V A
 
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