fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032428 not found in 264aa AT5G54680.1 not_1st 0.610389610 II
Pt024472 not found in 243aa AT5G54680.1 not_1st 0.527272727 II
Pt018573 not found in 243aa AT5G54680.1 not_1st 0.503896103 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G54680.1     MVSP-ENANWICD---LIDADYGSFTI------------QGP---GFSWP----------
pt032428_POPTR_ MVSP-GNAALLLDYDQYINMDAINIPA------------QDPNFSAFSWPPLVQPHHHHQ
pt018573_POPTR_ MVSPNDNANWVFDCG-LIE----DVPVPVGEQLCLESLDETPN--GSLWS---------S
pt024472_POPTR_ MVSPNENDNWVFDCG-LIE----DISVPGGDLLGLESLDETPN--GSLWS---------S
                ****  *   : *    *:    ...             : *   .  *.          

AT5G54680.1     --------VQQPIGVSSNSS--------AGVDGSAGNSEASKEPGSKKRGRCESSSATSS
pt032428_POPTR_ HQQQQQQQQQQTLNAFAHTATVSCPNFGAEIDGSFGECDVQKEPCSKKRGRSESCSASSS
pt018573_POPTR_ HS-------------FNDTAFLS-----AEFNNSFENSDGLKEIGFRKRVRHGSGNAPGS
pt024472_POPTR_ HN-------------FTDSAFLS-----VEFNNSYENLDGHKESGSRKRVRPGSSNATGS
                                 .::        . .:.*  : :  **   :** *  * .*..*

AT5G54680.1     KACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSS
pt032428_POPTR_ KACREKLRRDRLNDKFIELGSILEPGRTPKTDKAAILVDAVRMVTQLRDEAQKLRDSNSS
pt018573_POPTR_ KACREKMRRDRLNDRFMELGALLDPGRPPKVDKSAMLVDAARMVTQLRDESQKLKESIES
pt024472_POPTR_ KACREKMRRDRLNDRFTELGALLDPGRPPKVDKSAILVDAARMVTQLRDESQKLKESNVS
                ****** *******:* ***::*:**..**.**:*:****.*******.*:***::*  *

AT5G54680.1     LQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQ
pt032428_POPTR_ LQEKIKELKAEKIELRDEKQRLKAEKEKLEHQLKAMSS-QPSFMPAPPAIPAAFAT-QGQ
pt018573_POPTR_ LQEKIDELKAEKNELRDEKQKLKMEKENLEWQQKALSP-PPTYLPHPPAIPAPFSA-PGQ
pt024472_POPTR_ LQEKIDELKAEKNELRDEKQRLKTEKENLERQVKALST-PPNFLPHPSAIPAPFSA-PGQ
                **:**.***:** *******:** ***:** * **:..  *.::* *. :*:.*::  **

AT5G54680.1     APGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA
pt032428_POPTR_ APGNKLMPFIGYPGVAMWQFLPPAAVDTSQDHVLHPPVA
pt018573_POPTR_ VVGSKLMPFVGYPGISMWQFMPPTVVDTSQDHVLRPPVA
pt024472_POPTR_ VVGSKLMPFVGYPGISMWQFMPPAVVDTSQDHVLRPPVA
                . *.*::*::.***::****:**: *********:****
BoxShade v3.31 C (beta, 970507) Output
AT5G54680.1     M V S P - E N A N W I C D - - - L I D A D Y G S F T I - - - - - - - - - - - - Q G P - - - G F S W P - - - - - - - - - -
pt032428_POPTR_    M V S P - G N A A L L L D Y D Q Y I N M D A I N I P A - - - - - - - - - - - - Q D P N F S A F S W P P L V Q P H H H H Q
pt018573_POPTR_    M V S P N D N A N W V F D C G - L I E - - - - D V P V P V G E Q L C L E S L D E T P N - - G S L W S - - - - - - - - - S
pt024472_POPTR_    M V S P N E N D N W V F D C G - L I E - - - - D I S V P G G D L L G L E S L D E T P N - - G S L W S - - - - - - - - - S
 
AT5G54680.1     - - - - - - - - V Q Q P I G V S S N S S - - - - - - - - A G V D G S A G N S E A S K E P G S K K R G R C E S S S A T S S
pt032428_POPTR_    H Q Q Q Q Q Q Q Q Q Q T L N A F A H T A T V S C P N F G A E I D G S F G E C D V Q K E P C S K K R G R S E S C S A S S S
pt018573_POPTR_    H S - - - - - - - - - - - - - F N D T A F L S - - - - - A E F N N S F E N S D G L K E I G F R K R V R H G S G N A P G S
pt024472_POPTR_    H N - - - - - - - - - - - - - F T D S A F L S - - - - - V E F N N S Y E N L D G H K E S G S R K R V R P G S S N A T G S
 
AT5G54680.1     K A C R E K Q R R D R L N D K F M E L G A I L E P G N P P K T D K A A I L V D A V R M V T Q L R G E A Q K L K D S N S S
pt032428_POPTR_    K A C R E K L R R D R L N D K F I E L G S I L E P G R T P K T D K A A I L V D A V R M V T Q L R D E A Q K L R D S N S S
pt018573_POPTR_    K A C R E K M R R D R L N D R F M E L G A L L D P G R P P K V D K S A M L V D A A R M V T Q L R D E S Q K L K E S I E S
pt024472_POPTR_    K A C R E K M R R D R L N D R F T E L G A L L D P G R P P K V D K S A I L V D A A R M V T Q L R D E S Q K L K E S N V S
 
AT5G54680.1     L Q D K I K E L K T E K N E L R D E K Q R L K T E K E K L E Q Q L K A M N A P Q P S F F P A P P M M P T A F A S A Q G Q
pt032428_POPTR_    L Q E K I K E L K A E K I E L R D E K Q R L K A E K E K L E H Q L K A M S S - Q P S F M P A P P A I P A A F A T - Q G Q
pt018573_POPTR_    L Q E K I D E L K A E K N E L R D E K Q K L K M E K E N L E W Q Q K A L S P - P P T Y L P H P P A I P A P F S A - P G Q
pt024472_POPTR_    L Q E K I D E L K A E K N E L R D E K Q R L K T E K E N L E R Q V K A L S T - P P N F L P H P S A I P A P F S A - P G Q
 
AT5G54680.1     A P G N K M V P I I S Y P G V A M W Q F M P P A S V D T S Q D H V L R P P V A
pt032428_POPTR_    A P G N K L M P F I G Y P G V A M W Q F L P P A A V D T S Q D H V L H P P V A
pt018573_POPTR_    V V G S K L M P F V G Y P G I S M W Q F M P P T V V D T S Q D H V L R P P V A
pt024472_POPTR_    V V G S K L M P F V G Y P G I S M W Q F M P P A V V D T S Q D H V L R P P V A
 
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