fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025862 not found in 249aa AT5G54680.1 1st_1st 0.664935064 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G54680.1     MVSPENANWICDLIDADYGSFTIQGP---GFSW-----PVQQ---------PIGVSSNSS
pt025862_POPTR_ MASTGNAGWVSDSYFMD--DITVHDPNFSGFSWPSPSPPVQQQQHHQTPFAPVVTASSPN
                *.*. **.*:.*    *  .:*::.*   ****     ****         *: .:*...

AT5G54680.1     AG--VDGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPG
pt025862_POPTR_ FGEEIDGSFGDCDVHKEPNSKKRSRSESCSASSSKACREKLRRDRLNDKFMELGSILDPG
                 *  :*** *:.:. ***.****.*.**.**:******** *************:**:**

AT5G54680.1     NPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEK
pt025862_POPTR_ RTPKTDKAAILVDAVRIVTQLRGEAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEK
                ..**************:*******************:******:*************:**

AT5G54680.1     EKLEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASV
pt025862_POPTR_ EKLEQQLKTMNS-QPSFMPAPPAIPAAF-TTQGQAPGNKLMPFISYPGVAMWQFMPPAAV
                ********:**: ****:**** :*:** ::********::*:***************:*

AT5G54680.1     DTSQDHVLRPPVA
pt025862_POPTR_ DTSQDHVLRPPVA
                *************
BoxShade v3.31 C (beta, 970507) Output
AT5G54680.1     M V S P E N A N W I C D L I D A D Y G S F T I Q G P - - - G F S W - - - - - P V Q Q - - - - - - - - - P I G V S S N S S
pt025862_POPTR_    M A S T G N A G W V S D S Y F M D - - D I T V H D P N F S G F S W P S P S P P V Q Q Q Q H H Q T P F A P V V T A S S P N
 
AT5G54680.1     A G - - V D G S A G N S E A S K E P G S K K R G R C E S S S A T S S K A C R E K Q R R D R L N D K F M E L G A I L E P G
pt025862_POPTR_    F G E E I D G S F G D C D V H K E P N S K K R S R S E S C S A S S S K A C R E K L R R D R L N D K F M E L G S I L D P G
 
AT5G54680.1     N P P K T D K A A I L V D A V R M V T Q L R G E A Q K L K D S N S S L Q D K I K E L K T E K N E L R D E K Q R L K T E K
pt025862_POPTR_    R T P K T D K A A I L V D A V R I V T Q L R G E A Q K L K D S N S S L Q E K I K E L K A E K N E L R D E K Q R L K A E K
 
AT5G54680.1     E K L E Q Q L K A M N A P Q P S F F P A P P M M P T A F A S A Q G Q A P G N K M V P I I S Y P G V A M W Q F M P P A S V
pt025862_POPTR_    E K L E Q Q L K T M N S - Q P S F M P A P P A I P A A F - T T Q G Q A P G N K L M P F I S Y P G V A M W Q F M P P A A V
 
AT5G54680.1     D T S Q D H V L R P P V A
pt025862_POPTR_    D T S Q D H V L R P P V A
 
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