fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025862 not found in 249aa AT5G54680.1 1st_1st 0.664935064 Ia
Pt032428 not found in 264aa AT5G54680.1 not_1st 0.610389610 II
Pt024472 not found in 243aa AT5G54680.1 not_1st 0.527272727 II
Pt018573 not found in 243aa AT5G54680.1 not_1st 0.503896103 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G54680.1     MVSP-ENANWICDLIDAD----YGSFTI------------QGP---GFSWP---------
pt024472_POPTR_ MVSPNENDNWV-----FDCGL-IEDISVPGGDLLGLESLDETPN--GSLWSS--------
pt032428_POPTR_ MVSP-GNAALLL---DYDQYINMDAINIP----------AQDPNFSAFSWPPLVQPHHHH
pt018573_POPTR_ MVSPNDNANWV-----FDCGL-IEDVPVPVGEQLCLESLDETPN--GSLWSS--------
pt025862_POPTR_ MAST-GNAGWV-----SDSYF-MDDITV------------HDPNFSGFSWPSPSPP----
                *.*.  *   :      *       . :            . *   .  *.         

AT5G54680.1     ----VQQ--------PIG-----VSSNSSAGVDGSAGNSEASKEPGSKKRGRCESSSATS
pt024472_POPTR_ -H-------------NFT-----DSAFLSVEFNNSYENLDGHKESGSRKRVRPGSSNATG
pt032428_POPTR_ QHQQQQQQQQQQTLNAFAHTATVSCPNFGAEIDGSFGECDVQKEPCSKKRGRSESCSASS
pt018573_POPTR_ -H-------------SFN-----DTAFLSAEFNNSFENSDGLKEIGFRKRVRHGSGNAPG
pt025862_POPTR_ ----VQQQQHHQT--PFAPVVTASSPNFGEEIDGSFGDCDVHKEPNSKKRSRSESCSASS
                                :        .  .  .:.*  : :  **   :** *  * .*..

AT5G54680.1     SKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNS
pt024472_POPTR_ SKACREKMRRDRLNDRFTELGALLDPGRPPKVDKSAILVDAARMVTQLRDESQKLKESNV
pt032428_POPTR_ SKACREKLRRDRLNDKFIELGSILEPGRTPKTDKAAILVDAVRMVTQLRDEAQKLRDSNS
pt018573_POPTR_ SKACREKMRRDRLNDRFMELGALLDPGRPPKVDKSAMLVDAARMVTQLRDESQKLKESIE
pt025862_POPTR_ SKACREKLRRDRLNDKFMELGSILDPGRTPKTDKAAILVDAVRIVTQLRGEAQKLKDSNS
                ******* *******:* ***::*:**..**.**:*:****.*:*****.*:***::*  

AT5G54680.1     SLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAFASAQG
pt024472_POPTR_ SLQEKIDELKAEKNELRDEKQRLKTEKENLERQVKALST-PPNFLPHPSAIPAPFSA-PG
pt032428_POPTR_ SLQEKIKELKAEKIELRDEKQRLKAEKEKLEHQLKAMSS-QPSFMPAPPAIPAAFAT-QG
pt018573_POPTR_ SLQEKIDELKAEKNELRDEKQKLKMEKENLEWQQKALSP-PPTYLPHPPAIPAPFSA-PG
pt025862_POPTR_ SLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKTMNS-QPSFMPAPPAIPAAFTT-QG
                ***:**.***:** *******:** ***:** * *::..  *.::* *. :*:.*::  *

AT5G54680.1     QAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA
pt024472_POPTR_ QVVGSKLMPFVGYPGISMWQFMPPAVVDTSQDHVLRPPVA
pt032428_POPTR_ QAPGNKLMPFIGYPGVAMWQFLPPAAVDTSQDHVLHPPVA
pt018573_POPTR_ QVVGSKLMPFVGYPGISMWQFMPPTVVDTSQDHVLRPPVA
pt025862_POPTR_ QAPGNKLMPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA
                *. *.*::*::.***::****:**: *********:****
BoxShade v3.31 C (beta, 970507) Output
AT5G54680.1     M V S P - E N A N W I C D L I D A D - - - - Y G S F T I - - - - - - - - - - - - Q G P - - - G F S W P - - - - - - - - -
pt024472_POPTR_    M V S P N E N D N W V - - - - - F D C G L - I E D I S V P G G D L L G L E S L D E T P N - - G S L W S S - - - - - - - -
pt032428_POPTR_    M V S P - G N A A L L L - - - D Y D Q Y I N M D A I N I P - - - - - - - - - - A Q D P N F S A F S W P P L V Q P H H H H
pt018573_POPTR_    M V S P N D N A N W V - - - - - F D C G L - I E D V P V P V G E Q L C L E S L D E T P N - - G S L W S S - - - - - - - -
pt025862_POPTR_    M A S T - G N A G W V - - - - - S D S Y F - M D D I T V - - - - - - - - - - - - H D P N F S G F S W P S P S P P - - - -
 
AT5G54680.1     - - - - V Q Q - - - - - - - - P I G - - - - - V S S N S S A G V D G S A G N S E A S K E P G S K K R G R C E S S S A T S
pt024472_POPTR_    - H - - - - - - - - - - - - - N F T - - - - - D S A F L S V E F N N S Y E N L D G H K E S G S R K R V R P G S S N A T G
pt032428_POPTR_    Q H Q Q Q Q Q Q Q Q Q Q T L N A F A H T A T V S C P N F G A E I D G S F G E C D V Q K E P C S K K R G R S E S C S A S S
pt018573_POPTR_    - H - - - - - - - - - - - - - S F N - - - - - D T A F L S A E F N N S F E N S D G L K E I G F R K R V R H G S G N A P G
pt025862_POPTR_    - - - - V Q Q Q Q H H Q T - - P F A P V V T A S S P N F G E E I D G S F G D C D V H K E P N S K K R S R S E S C S A S S
 
AT5G54680.1     S K A C R E K Q R R D R L N D K F M E L G A I L E P G N P P K T D K A A I L V D A V R M V T Q L R G E A Q K L K D S N S
pt024472_POPTR_    S K A C R E K M R R D R L N D R F T E L G A L L D P G R P P K V D K S A I L V D A A R M V T Q L R D E S Q K L K E S N V
pt032428_POPTR_    S K A C R E K L R R D R L N D K F I E L G S I L E P G R T P K T D K A A I L V D A V R M V T Q L R D E A Q K L R D S N S
pt018573_POPTR_    S K A C R E K M R R D R L N D R F M E L G A L L D P G R P P K V D K S A M L V D A A R M V T Q L R D E S Q K L K E S I E
pt025862_POPTR_    S K A C R E K L R R D R L N D K F M E L G S I L D P G R T P K T D K A A I L V D A V R I V T Q L R G E A Q K L K D S N S
 
AT5G54680.1     S L Q D K I K E L K T E K N E L R D E K Q R L K T E K E K L E Q Q L K A M N A P Q P S F F P A P P M M P T A F A S A Q G
pt024472_POPTR_    S L Q E K I D E L K A E K N E L R D E K Q R L K T E K E N L E R Q V K A L S T - P P N F L P H P S A I P A P F S A - P G
pt032428_POPTR_    S L Q E K I K E L K A E K I E L R D E K Q R L K A E K E K L E H Q L K A M S S - Q P S F M P A P P A I P A A F A T - Q G
pt018573_POPTR_    S L Q E K I D E L K A E K N E L R D E K Q K L K M E K E N L E W Q Q K A L S P - P P T Y L P H P P A I P A P F S A - P G
pt025862_POPTR_    S L Q E K I K E L K A E K N E L R D E K Q R L K A E K E K L E Q Q L K T M N S - Q P S F M P A P P A I P A A F T T - Q G
 
AT5G54680.1     Q A P G N K M V P I I S Y P G V A M W Q F M P P A S V D T S Q D H V L R P P V A
pt024472_POPTR_    Q V V G S K L M P F V G Y P G I S M W Q F M P P A V V D T S Q D H V L R P P V A
pt032428_POPTR_    Q A P G N K L M P F I G Y P G V A M W Q F L P P A A V D T S Q D H V L H P P V A
pt018573_POPTR_    Q V V G S K L M P F V G Y P G I S M W Q F M P P T V V D T S Q D H V L R P P V A
pt025862_POPTR_    Q A P G N K L M P F I S Y P G V A M W Q F M P P A A V D T S Q D H V L R P P V A
 
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