fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023885 not found in 382aa AT5G54680.1 1st_1st 0.454545454 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G54680.1     --------------MVSPENANWI--CDLID-----ADYGSFTIQGP--GFSW-------
Sb023885_Sorbi1 PTPAICRWPRRSPAMASPEGTTWVFDCPLMDDLAVAADFAA----APAGGFFWAAPPSLQ
                              *.***.:.*:  * *:*     **:.:    .*  ** *       

AT5G54680.1     ------PVQQPIGVSSNS-----SAGVDGSAGNSEASKEPGSKKRGRCESSSATSSKACR
Sb023885_Sorbi1 PQVVQAPVQSVVAASAPNPCVEISSSVDCGQG-----KEQPTNKRPRSESTAEPSTKASR
                      ***. :..*: .     *:.** . *     **  ::** *.**:: .*:**.*

AT5G54680.1     EKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDK
Sb023885_Sorbi1 EKIRRDKLNERFLELGAILEPGKTPKMDKSAILNDAIRVVGELRSEAKELKDSNESLQEK
                ** ***:**::*:*********:.** **:*** **:*:* :**.**::*****.***:*

AT5G54680.1     IKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPPMMP-TAFASAQGQA-P
Sb023885_Sorbi1 IKELKAEKNELRDEKQRLKAEKESLEQQIKFLNA-RPSLVPHHPVISASAFTAPQGPAVA
                *****:*************:***.****:* :** :**:.*  *::. :**::.** * .

AT5G54680.1     GNK-MVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA
Sb023885_Sorbi1 GHKLMMPVLGYPGFPMWQFMPPSDVDTSDDPKSCPPVA
                *:* *:*::.***..*******:.****:*    ****
BoxShade v3.31 C (beta, 970507) Output
AT5G54680.1     - - - - - - - - - - - - - - M V S P E N A N W I - - C D L I D - - - - - A D Y G S F T I Q G P - - G F S W - - - - - - -
Sb023885_Sorbi1    P T P A I C R W P R R S P A M A S P E G T T W V F D C P L M D D L A V A A D F A A - - - - A P A G G F F W A A P P S L Q
 
AT5G54680.1     - - - - - - P V Q Q P I G V S S N S - - - - - S A G V D G S A G N S E A S K E P G S K K R G R C E S S S A T S S K A C R
Sb023885_Sorbi1    P Q V V Q A P V Q S V V A A S A P N P C V E I S S S V D C G Q G - - - - - K E Q P T N K R P R S E S T A E P S T K A S R
 
AT5G54680.1     E K Q R R D R L N D K F M E L G A I L E P G N P P K T D K A A I L V D A V R M V T Q L R G E A Q K L K D S N S S L Q D K
Sb023885_Sorbi1    E K I R R D K L N E R F L E L G A I L E P G K T P K M D K S A I L N D A I R V V G E L R S E A K E L K D S N E S L Q E K
 
AT5G54680.1     I K E L K T E K N E L R D E K Q R L K T E K E K L E Q Q L K A M N A P Q P S F F P A P P M M P - T A F A S A Q G Q A - P
Sb023885_Sorbi1    I K E L K A E K N E L R D E K Q R L K A E K E S L E Q Q I K F L N A - R P S L V P H H P V I S A S A F T A P Q G P A V A
 
AT5G54680.1     G N K - M V P I I S Y P G V A M W Q F M P P A S V D T S Q D H V L R P P V A
Sb023885_Sorbi1    G H K L M M P V L G Y P G F P M W Q F M P P S D V D T S D D P K S C P P V A
 
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