fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034379 not found in 233aa AT5G54680.1 not_1st 0.664935064 II
Gm037534 not found in 234aa AT5G54680.1 not_1st 0.662337662 II
Gm033627 not found in 236aa AT5G54680.1 not_1st 0.651948051 II
Gm033629 not found in 234aa AT5G54680.1 not_1st 0.636363636 II
Gm033630 not found in 210aa AT5G54680.1 not_1st 0.516883116 II
Gm033628 not found in 148aa AT5G54680.1 not_1st 0.441558441 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G54680.1     MVSPENANWICD--LIDADY-----GSFTIQGPGFSWPVQQP--IGVSSNSSAGVDGSAG
gm033628_Glyma1 --------------MM--DMI---------------------------------------
gm033630_Glyma1 MVSRENTNWLFDYGLI--DDIPVPDATFGVNSSAFTWP---PNALDAPSNVGVDIDGSLG
gm033627_Glyma1 MVSRENTNWLFDYGLI--DDIPVPDATFGVNSSAFTWP---PNALDAPSNVGVDIDGSLG
gm034379_Glyma1 MVSPENSNWLFDYPLI-DDVIPVGDASFSVSASAFSWP---P----PPANVSVEIDASLG
gm033629_Glyma1 MVSRENTNWLFDYGLI--DDIPVPDATFGVNSSAFTWP---PNALDAPSNVGVDIDGSLG
gm037534_Glyma1 MVSPENSNWLFDYPLIDDDVIPVGDSSFAVSASTFSWP---P----PPANVSVEIDASLG
                              ::  *                                         

AT5G54680.1     NSEASKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAI
gm033628_Glyma1 --------------------------------------RFVELGSILEPGRPAKTDKTAI
gm033630_Glyma1 DSDGLKESGSKK--------------------------RFVELGSILEPGRPAKTDKTAI
gm033627_Glyma1 DSDGLKESGSKKRVRSESCAASSSKACREKLRRDRLNDKFVELGSILEPGRPAKTDKTAI
gm034379_Glyma1 DSDGPKDTALKKRARCDSSTASSSKACREKLRRDRLNDKFVELGSILEPGRPPKTDKAAI
gm033629_Glyma1 DSDGLKESGSKK--RSESCAASSSKACREKLRRDRLNDKFVELGSILEPGRPAKTDKTAI
gm037534_Glyma1 DSDGLKNPALKKRTKSDSSTASSSKACREKLRRDRLNDKFVELGSILEPGRPPKTDKASI
                                                      :*:***:*****.*.****::*

AT5G54680.1     LVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAM
gm033628_Glyma1 LIDAVRMVTQLRGEAQKLKDTNQGLQEKIKDLKAEKNELRDQKQRLKAEKEKLEQQLKSL
gm033630_Glyma1 LIDAVRMVTQLRGEAQKLKDTNQGLQEKIKDLKAEKNELRDQKQRLKAEKEKLEQQLKSL
gm033627_Glyma1 LIDAVRMVTQLRGEAQKLKDTNQGLQEKIKDLKAEKNELRDQKQRLKAEKEKLEQQLKSL
gm034379_Glyma1 LIDAARMVTQLRDEALKLKDSNTSLQEKIKELKAEKNELRDEKQRLKAEKEKLEMQVKSM
gm033629_Glyma1 LIDAVRMVTQLRGEAQKLKDTNQGLQEKIKDLKAEKNELRDQKQRLKAEKEKLEQQLKSL
gm037534_Glyma1 LIDAARMVTQLRDEALKLKDSNTSLQEKIKELKAEKNELRDEKQRLKAEKEKLEVQVKSM
                *:**.*******.** ****:* .**:***:**:*******:*****:****** *:*::

AT5G54680.1     NAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRP
gm033628_Glyma1 NG-QPSFMPPPAAIPAAFA-VQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRP
gm033630_Glyma1 NG-QPSFMPPPAAIPAAFA-VQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRP
gm033627_Glyma1 NG-QPSFMPPPAAIPAAFA-VQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRP
gm034379_Glyma1 NA-QPAFLPPPPAIPAAFA-PQGQAPGNKLMPFIRYPGVAMWQFMPPATMDTSQDHVLRP
gm033629_Glyma1 NG-QPSFMPPPAAIPAAFA-VQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRP
gm037534_Glyma1 NA-QPAFLPPPPAIPAAFA-PQGQAPGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRP
                *. **:*:*.*. :*:***  **** ***::*:* *************::**********

AT5G54680.1     PVA
gm033628_Glyma1 PVA
gm033630_Glyma1 PVA
gm033627_Glyma1 PVA
gm034379_Glyma1 PVA
gm033629_Glyma1 PVA
gm037534_Glyma1 PVA
                ***
BoxShade v3.31 C (beta, 970507) Output
AT5G54680.1     M V S P E N A N W I C D - - L I D A D Y - - - - - G S F T I Q G P G F S W P V Q Q P - - I G V S S N S S A G V D G S A G
gm033628_Glyma1    - - - - - - - - - - - - - - M M - - D M I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm033630_Glyma1    M V S R E N T N W L F D Y G L I - - D D I P V P D A T F G V N S S A F T W P - - - P N A L D A P S N V G V D I D G S L G
gm033627_Glyma1    M V S R E N T N W L F D Y G L I - - D D I P V P D A T F G V N S S A F T W P - - - P N A L D A P S N V G V D I D G S L G
gm034379_Glyma1    M V S P E N S N W L F D Y P L I - D D V I P V G D A S F S V S A S A F S W P - - - P - - - - P P A N V S V E I D A S L G
gm033629_Glyma1    M V S R E N T N W L F D Y G L I - - D D I P V P D A T F G V N S S A F T W P - - - P N A L D A P S N V G V D I D G S L G
gm037534_Glyma1    M V S P E N S N W L F D Y P L I D D D V I P V G D S S F A V S A S T F S W P - - - P - - - - P P A N V S V E I D A S L G
 
AT5G54680.1     N S E A S K E P G S K K R G R C E S S S A T S S K A C R E K Q R R D R L N D K F M E L G A I L E P G N P P K T D K A A I
gm033628_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R F V E L G S I L E P G R P A K T D K T A I
gm033630_Glyma1    D S D G L K E S G S K K - - - - - - - - - - - - - - - - - - - - - - - - - - R F V E L G S I L E P G R P A K T D K T A I
gm033627_Glyma1    D S D G L K E S G S K K R V R S E S C A A S S S K A C R E K L R R D R L N D K F V E L G S I L E P G R P A K T D K T A I
gm034379_Glyma1    D S D G P K D T A L K K R A R C D S S T A S S S K A C R E K L R R D R L N D K F V E L G S I L E P G R P P K T D K A A I
gm033629_Glyma1    D S D G L K E S G S K K - - R S E S C A A S S S K A C R E K L R R D R L N D K F V E L G S I L E P G R P A K T D K T A I
gm037534_Glyma1    D S D G L K N P A L K K R T K S D S S T A S S S K A C R E K L R R D R L N D K F V E L G S I L E P G R P P K T D K A S I
 
AT5G54680.1     L V D A V R M V T Q L R G E A Q K L K D S N S S L Q D K I K E L K T E K N E L R D E K Q R L K T E K E K L E Q Q L K A M
gm033628_Glyma1    L I D A V R M V T Q L R G E A Q K L K D T N Q G L Q E K I K D L K A E K N E L R D Q K Q R L K A E K E K L E Q Q L K S L
gm033630_Glyma1    L I D A V R M V T Q L R G E A Q K L K D T N Q G L Q E K I K D L K A E K N E L R D Q K Q R L K A E K E K L E Q Q L K S L
gm033627_Glyma1    L I D A V R M V T Q L R G E A Q K L K D T N Q G L Q E K I K D L K A E K N E L R D Q K Q R L K A E K E K L E Q Q L K S L
gm034379_Glyma1    L I D A A R M V T Q L R D E A L K L K D S N T S L Q E K I K E L K A E K N E L R D E K Q R L K A E K E K L E M Q V K S M
gm033629_Glyma1    L I D A V R M V T Q L R G E A Q K L K D T N Q G L Q E K I K D L K A E K N E L R D Q K Q R L K A E K E K L E Q Q L K S L
gm037534_Glyma1    L I D A A R M V T Q L R D E A L K L K D S N T S L Q E K I K E L K A E K N E L R D E K Q R L K A E K E K L E V Q V K S M
 
AT5G54680.1     N A P Q P S F F P A P P M M P T A F A S A Q G Q A P G N K M V P I I S Y P G V A M W Q F M P P A S V D T S Q D H V L R P
gm033628_Glyma1    N G - Q P S F M P P P A A I P A A F A - V Q G Q A H G N K L V P F I S Y P G V A M W Q F M P P A A V D T S Q D H V L R P
gm033630_Glyma1    N G - Q P S F M P P P A A I P A A F A - V Q G Q A H G N K L V P F I S Y P G V A M W Q F M P P A A V D T S Q D H V L R P
gm033627_Glyma1    N G - Q P S F M P P P A A I P A A F A - V Q G Q A H G N K L V P F I S Y P G V A M W Q F M P P A A V D T S Q D H V L R P
gm034379_Glyma1    N A - Q P A F L P P P P A I P A A F A - P Q G Q A P G N K L M P F I R Y P G V A M W Q F M P P A T M D T S Q D H V L R P
gm033629_Glyma1    N G - Q P S F M P P P A A I P A A F A - V Q G Q A H G N K L V P F I S Y P G V A M W Q F M P P A A V D T S Q D H V L R P
gm037534_Glyma1    N A - Q P A F L P P P P A I P A A F A - P Q G Q A P G N K L V P F I S Y P G V A M W Q F M P P A A V D T S Q D H V L R P
 
AT5G54680.1     P V A
gm033628_Glyma1    P V A
gm033630_Glyma1    P V A
gm033627_Glyma1    P V A
gm034379_Glyma1    P V A
gm033629_Glyma1    P V A
gm037534_Glyma1    P V A
 
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