fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G54680.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016330 not found in 236aa AT5G54680.1 1st_1st 0.664935064 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G54680.1     MVSPENANWICD--LID---ADYGSFTIQGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEA
gm016330_Glyma0 MVSRENTNWLFDYGLIDDIPVPDATFGVNSSAFTWP-PNALNASSNVGVEIDGSLGDSDS
                *** **:**: *  ***   .  .:* ::...*:**  :.:..*** .. :*** *:*::

AT5G54680.1     SKEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDA
gm016330_Glyma0 LKESGSKKRVRSESCAASGSKACREKLRRDRLNDKFVELGAILEPGRPAKTDKAAILIDA
                 **.***** *.**.:*:.******* *********:*********.*.********:**

AT5G54680.1     VRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQ
gm016330_Glyma0 VRMVTQLRGEAQKLKDTNQGLQEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKSLNA-Q
                ****************:*..**:******:*************:**********::** *

AT5G54680.1     PSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA
gm016330_Glyma0 PSFMPPPAAMPAAFA-AQGQAHGNKLVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA
                ***:*.*. **:*** ***** ***:**:***************:**************
BoxShade v3.31 C (beta, 970507) Output
AT5G54680.1     M V S P E N A N W I C D - - L I D - - - A D Y G S F T I Q G P G F S W P V Q Q P I G V S S N S S A G V D G S A G N S E A
gm016330_Glyma0    M V S R E N T N W L F D Y G L I D D I P V P D A T F G V N S S A F T W P - P N A L N A S S N V G V E I D G S L G D S D S
 
AT5G54680.1     S K E P G S K K R G R C E S S S A T S S K A C R E K Q R R D R L N D K F M E L G A I L E P G N P P K T D K A A I L V D A
gm016330_Glyma0    L K E S G S K K R V R S E S C A A S G S K A C R E K L R R D R L N D K F V E L G A I L E P G R P A K T D K A A I L I D A
 
AT5G54680.1     V R M V T Q L R G E A Q K L K D S N S S L Q D K I K E L K T E K N E L R D E K Q R L K T E K E K L E Q Q L K A M N A P Q
gm016330_Glyma0    V R M V T Q L R G E A Q K L K D T N Q G L Q E K I K E L K A E K N E L R D E K Q R L K A E K E K L E Q Q L K S L N A - Q
 
AT5G54680.1     P S F F P A P P M M P T A F A S A Q G Q A P G N K M V P I I S Y P G V A M W Q F M P P A S V D T S Q D H V L R P P V A
gm016330_Glyma0    P S F M P P P A A M P A A F A - A Q G Q A H G N K L V P F I S Y P G V A M W Q F M P P A A V D T S Q D H V L R P P V A
 
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