fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G55690.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm020769 not found in 273aa AT5G55690.1 1st_1st 0.156896551 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G55690.1     MGRKMVKMTRITNEKTRITTYKKRKACLYKKASEFSTLCGVDTCVIVYGPSRAGDEMVME
gm020769_Glyma0 MGRGRIPMELIKEEKACEKTFHKRKKGLLKKAYEFSTLCAVDVGVIIYAP-----KYLNE
                ***  : *  *.:**:  .*::***  * *** ******.**. **:*.*     : : *

AT5G55690.1     PELWP--KDGSKVREILTKYRDTASSSCTKTYTVQEC-------LEKNNTKVEKPTIATK
gm020769_Glyma0 PETWPQDKDSREVKRVIQKYHNTTSDRHPKVYDVQEYFNDRMKKIESEISKVHKEEIKLM
                ** **  **. :*:.:: **::*:*.  .*.* ***        :*.: :**.*  *   

AT5G55690.1     YPTW-------------------DKKLDQCS--LN----DLYAVFMAVENKIQEATNRNQ
gm020769_Glyma0 YPTWNESYNTLGEKQLRMFVGILDAKLDACNQRMNMLKQDSKGKGIAKSDKIETLT----
                ****                   * *** *.  :*    *  .  :* .:**:  *    

AT5G55690.1     TFPDTSCWSNDQLGLCGYNRQCFEQYQLFPLPTMDYNGLSFFPFNNQMTSNTAEVSSFSN
gm020769_Glyma0 --PYMA--SN-----LGSHLNFMSQTQLFT-PS-DNNQVAFYPFQ------------LSQ
                  *  :  **      * : : :.* ***. *: * * ::*:**:            :*:

AT5G55690.1     VTEPMIANGQSLFYG--SCSDGPYGPMVQRTAYMEPIHW----GLGNSMFNNVKQFQDYP
gm020769_Glyma0 SSQP------STFHGGQSCVQ-----LMEKNAMVD---WANQVGVGANCDPKMGVLKE--
                 ::*      * *:*  ** :     ::::.* ::   *    *:* .   ::  :::  

AT5G55690.1     FRFAQVNDLEDSSKLSM-------
gm020769_Glyma0 ---DQSNKTQNSSPCYYNGNMQTT
                    * *. ::**
BoxShade v3.31 C (beta, 970507) Output
AT5G55690.1     M G R K M V K M T R I T N E K T R I T T Y K K R K A C L Y K K A S E F S T L C G V D T C V I V Y G P S R A G D E M V M E
gm020769_Glyma0    M G R G R I P M E L I K E E K A C E K T F H K R K K G L L K K A Y E F S T L C A V D V G V I I Y A P - - - - - K Y L N E
 
AT5G55690.1     P E L W P - - K D G S K V R E I L T K Y R D T A S S S C T K T Y T V Q E C - - - - - - - L E K N N T K V E K P T I A T K
gm020769_Glyma0    P E T W P Q D K D S R E V K R V I Q K Y H N T T S D R H P K V Y D V Q E Y F N D R M K K I E S E I S K V H K E E I K L M
 
AT5G55690.1     Y P T W - - - - - - - - - - - - - - - - - - - D K K L D Q C S - - L N - - - - D L Y A V F M A V E N K I Q E A T N R N Q
gm020769_Glyma0    Y P T W N E S Y N T L G E K Q L R M F V G I L D A K L D A C N Q R M N M L K Q D S K G K G I A K S D K I E T L T - - - -
 
AT5G55690.1     T F P D T S C W S N D Q L G L C G Y N R Q C F E Q Y Q L F P L P T M D Y N G L S F F P F N N Q M T S N T A E V S S F S N
gm020769_Glyma0    - - P Y M A - - S N - - - - - L G S H L N F M S Q T Q L F T - P S - D N N Q V A F Y P F Q - - - - - - - - - - - - L S Q
 
AT5G55690.1     V T E P M I A N G Q S L F Y G - - S C S D G P Y G P M V Q R T A Y M E P I H W - - - - G L G N S M F N N V K Q F Q D Y P
gm020769_Glyma0    S S Q P - - - - - - S T F H G G Q S C V Q - - - - - L M E K N A M V D - - - W A N Q V G V G A N C D P K M G V L K E - -
 
AT5G55690.1     F R F A Q V N D L E D S S K L S M - - - - - - -
gm020769_Glyma0    - - - D Q S N K T Q N S S P C Y Y N G N M Q T T
 
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