fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56110.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp021115 not found in 260aa AT5G56110.1 1st_1st 0.457685664 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G56110.1     MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
pp021115_Pp1s65 MGRAPCCEKDSVKRGPWTPEEDAKLLACIAQHGTGSWRTLPKKAGLQRCGKSCRLRWTNY
                *** *****:.**** ****** ** : ****** .** :**:*****************

AT5G56110.1     LRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNTKLKKKLSGMG
pp021115_Pp1s65 LRPDLKHGRFTDHEEQLIVNLHAALGSRWSLIAAQLPGRTDNDVKNYWNTRLKKKLCEMG
                ********:*:: **::**::*:.**.***********************:*****. **

AT5G56110.1     IDPVTHKPFSHLMAEITTTLNPPQVSHLAEAALGCFKDEMLHLLTKKRVDLNQINFSNHN
pp021115_Pp1s65 IDPITHKPISQLLADLAGSMALPKGGDIAEATLGCFKDDMLNVLMRKRPDW-QSDGSN--
                ***:****:*:*:*::: ::  *: ..:***:******:**::* :** *  * : **  

AT5G56110.1     PNPNNFHEIADNEAGKIKMDGLDHGNGIMKLWDMGNGFSYGSSSSSFGNEERNDGSASPA
pp021115_Pp1s65 ----------------------------VTLPNIPHGFSVGRQSW--------DIVAGPQ
                                            :.* :: :*** * .*         *  *.* 

AT5G56110.1     VAAWRGHGGIRTAVAETAAAEEEER---RKLKGEVVDQEEIGSEGGRGDGMTMMRNHHHH
pp021115_Pp1s65 SCASQPRSVIANAYDTSVNDQYNSRLTNQNLQVDAVVQKFKYSLSRAGQTNEVIRSTKH-
                 .* : :. * .*   :.  : :.*   ::*: :.* *:   * .  *:   ::*. :* 

AT5G56110.1     QHVFNVDNVLWDLQADDLINHMV
pp021115_Pp1s65 -----------------------
BoxShade v3.31 C (beta, 970507) Output
AT5G56110.1     M G R I P C C E K E N V K R G Q W T P E E D N K L A S Y I A Q H G T R N W R L I P K N A G L Q R C G K S C R L R W T N Y
pp021115_Pp1s65    M G R A P C C E K D S V K R G P W T P E E D A K L L A C I A Q H G T G S W R T L P K K A G L Q R C G K S C R L R W T N Y
 
AT5G56110.1     L R P D L K H G Q F S E A E E H I I V K F H S V L G N R W S L I A A Q L P G R T D N D V K N Y W N T K L K K K L S G M G
pp021115_Pp1s65    L R P D L K H G R F T D H E E Q L I V N L H A A L G S R W S L I A A Q L P G R T D N D V K N Y W N T R L K K K L C E M G
 
AT5G56110.1     I D P V T H K P F S H L M A E I T T T L N P P Q V S H L A E A A L G C F K D E M L H L L T K K R V D L N Q I N F S N H N
pp021115_Pp1s65    I D P I T H K P I S Q L L A D L A G S M A L P K G G D I A E A T L G C F K D D M L N V L M R K R P D W - Q S D G S N - -
 
AT5G56110.1     P N P N N F H E I A D N E A G K I K M D G L D H G N G I M K L W D M G N G F S Y G S S S S S F G N E E R N D G S A S P A
pp021115_Pp1s65    - - - - - - - - - - - - - - - - - - - - - - - - - - - - V T L P N I P H G F S V G R Q S W - - - - - - - - D I V A G P Q
 
AT5G56110.1     V A A W R G H G G I R T A V A E T A A A E E E E R - - - R K L K G E V V D Q E E I G S E G G R G D G M T M M R N H H H H
pp021115_Pp1s65    S C A S Q P R S V I A N A Y D T S V N D Q Y N S R L T N Q N L Q V D A V V Q K F K Y S L S R A G Q T N E V I R S T K H -
 
AT5G56110.1     Q H V F N V D N V L W D L Q A D D L I N H M V
pp021115_Pp1s65    - - - - - - - - - - - - - - - - - - - - - - -
 
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