Input
| Putative repression domain
|
|
AT5G56110.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt025667 |
not found in 327aa |
AT5G56110.1 |
1st_1st |
0.595854922 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G56110.1 MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
pt025667_POPTR_ MGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
*********:***************:**********************************
AT5G56110.1 LRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNTKLKKKLSGMG
pt025667_POPTR_ LRPDLKHGQFSDAEEHTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKRKLSGMG
***********:**** ***:***:*********************:******:******
AT5G56110.1 IDPVTHKPFSHLMAEITTTLNPPQVSHLAEAALGCFKDEMLHLLTKKRVDL-------NQ
pt025667_POPTR_ IDPVTHKPFSHLMAEIATTLATPQVANLAEAALGCFKDEMLHLLTKKRIDFQLLQCNTNG
****************:*** .***::*********************:*: *
AT5G56110.1 INFSNHNPNPNNFHEIADNEAGKIKMDGLDHG---NGIM---KLWDMGNGFSYGSSS---
pt025667_POPTR_ VQGNTSSPYTATKHDENDDTIERIKL-GFSRAMQEPGILPPNKTWD-----STGATSANF
:: .. .* . . *: *: :**: *:.:. **: * ** * *::*
AT5G56110.1 ------------------SSFGNEERNDGSASPAVAAWRGHGGIRTAVAETAAAEEEERR
pt025667_POPTR_ AGTCAYFPSSVNAFLCGPSSFGNE--------VALSPWSQ----SMCTGSTCTAGDQQGR
****** *::.* ....*.:* ::: *
AT5G56110.1 KLKGEVVDQEEIGSEGGRGDGMTMMRNHHHHQHVFNVDNVLWDLQADDLINHMV
pt025667_POPTR_ -LHEKLDDENGEESQGGK-----EIRN---GSSLFNTDCVLWDLPSDDLMNSIV
*: :: *:: *:**: :** . :**.* ***** :***:* :*
BoxShade v3.31 C (beta, 970507) Output
AT5G56110.1 |
M |
G |
R |
I |
P |
C |
C |
E |
K |
E |
N |
V |
K |
R |
G |
Q |
W |
T |
P |
E |
E |
D |
N |
K |
L |
A |
S |
Y |
I |
A |
Q |
H |
G |
T |
R |
N |
W |
R |
L |
I |
P |
K |
N |
A |
G |
L |
Q |
R |
C |
G |
K |
S |
C |
R |
L |
R |
W |
T |
N |
Y |
pt025667_POPTR_ |
M |
G |
R |
I |
P |
C |
C |
E |
K |
D |
N |
V |
K |
R |
G |
Q |
W |
T |
P |
E |
E |
D |
N |
K |
L |
S |
S |
Y |
I |
A |
Q |
H |
G |
T |
R |
N |
W |
R |
L |
I |
P |
K |
N |
A |
G |
L |
Q |
R |
C |
G |
K |
S |
C |
R |
L |
R |
W |
T |
N |
Y |
|
AT5G56110.1 |
L |
R |
P |
D |
L |
K |
H |
G |
Q |
F |
S |
E |
A |
E |
E |
H |
I |
I |
V |
K |
F |
H |
S |
V |
L |
G |
N |
R |
W |
S |
L |
I |
A |
A |
Q |
L |
P |
G |
R |
T |
D |
N |
D |
V |
K |
N |
Y |
W |
N |
T |
K |
L |
K |
K |
K |
L |
S |
G |
M |
G |
pt025667_POPTR_ |
L |
R |
P |
D |
L |
K |
H |
G |
Q |
F |
S |
D |
A |
E |
E |
H |
T |
I |
V |
K |
L |
H |
S |
V |
V |
G |
N |
R |
W |
S |
L |
I |
A |
A |
Q |
L |
P |
G |
R |
T |
D |
N |
D |
V |
K |
N |
H |
W |
N |
T |
K |
L |
K |
R |
K |
L |
S |
G |
M |
G |
|
AT5G56110.1 |
I |
D |
P |
V |
T |
H |
K |
P |
F |
S |
H |
L |
M |
A |
E |
I |
T |
T |
T |
L |
N |
P |
P |
Q |
V |
S |
H |
L |
A |
E |
A |
A |
L |
G |
C |
F |
K |
D |
E |
M |
L |
H |
L |
L |
T |
K |
K |
R |
V |
D |
L |
- |
- |
- |
- |
- |
- |
- |
N |
Q |
pt025667_POPTR_ |
I |
D |
P |
V |
T |
H |
K |
P |
F |
S |
H |
L |
M |
A |
E |
I |
A |
T |
T |
L |
A |
T |
P |
Q |
V |
A |
N |
L |
A |
E |
A |
A |
L |
G |
C |
F |
K |
D |
E |
M |
L |
H |
L |
L |
T |
K |
K |
R |
I |
D |
F |
Q |
L |
L |
Q |
C |
N |
T |
N |
G |
|
AT5G56110.1 |
I |
N |
F |
S |
N |
H |
N |
P |
N |
P |
N |
N |
F |
H |
E |
I |
A |
D |
N |
E |
A |
G |
K |
I |
K |
M |
D |
G |
L |
D |
H |
G |
- |
- |
- |
N |
G |
I |
M |
- |
- |
- |
K |
L |
W |
D |
M |
G |
N |
G |
F |
S |
Y |
G |
S |
S |
S |
- |
- |
- |
pt025667_POPTR_ |
V |
Q |
G |
N |
T |
S |
S |
P |
Y |
T |
A |
T |
K |
H |
D |
E |
N |
D |
D |
T |
I |
E |
R |
I |
K |
L |
- |
G |
F |
S |
R |
A |
M |
Q |
E |
P |
G |
I |
L |
P |
P |
N |
K |
T |
W |
D |
- |
- |
- |
- |
- |
S |
T |
G |
A |
T |
S |
A |
N |
F |
|
AT5G56110.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
S |
F |
G |
N |
E |
E |
R |
N |
D |
G |
S |
A |
S |
P |
A |
V |
A |
A |
W |
R |
G |
H |
G |
G |
I |
R |
T |
A |
V |
A |
E |
T |
A |
A |
A |
E |
E |
E |
E |
R |
R |
pt025667_POPTR_ |
A |
G |
T |
C |
A |
Y |
F |
P |
S |
S |
V |
N |
A |
F |
L |
C |
G |
P |
S |
S |
F |
G |
N |
E |
- |
- |
- |
- |
- |
- |
- |
- |
V |
A |
L |
S |
P |
W |
S |
Q |
- |
- |
- |
- |
S |
M |
C |
T |
G |
S |
T |
C |
T |
A |
G |
D |
Q |
Q |
G |
R |
|
AT5G56110.1 |
K |
L |
K |
G |
E |
V |
V |
D |
Q |
E |
E |
I |
G |
S |
E |
G |
G |
R |
G |
D |
G |
M |
T |
M |
M |
R |
N |
H |
H |
H |
H |
Q |
H |
V |
F |
N |
V |
D |
N |
V |
L |
W |
D |
L |
Q |
A |
D |
D |
L |
I |
N |
H |
M |
V |
pt025667_POPTR_ |
- |
L |
H |
E |
K |
L |
D |
D |
E |
N |
G |
E |
E |
S |
Q |
G |
G |
K |
- |
- |
- |
- |
- |
E |
I |
R |
N |
- |
- |
- |
G |
S |
S |
L |
F |
N |
T |
D |
C |
V |
L |
W |
D |
L |
P |
S |
D |
D |
L |
M |
N |
S |
I |
V |
|
|