fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56110.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025667 not found in 327aa AT5G56110.1 1st_1st 0.595854922 Ia
Pt031289 not found in 327aa AT5G56110.1 not_1st 0.578583765 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G56110.1     MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
pt031289_POPTR_ MGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
pt025667_POPTR_ MGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
                *********:***************:**********************************

AT5G56110.1     LRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNTKLKKKLSGMG
pt031289_POPTR_ LRPDLKHGQFSDAEEQTIVKLHSVVGNRWSLIAAQLTGRTDNDVKNHWNTKLKKKLSGMG
pt025667_POPTR_ LRPDLKHGQFSDAEEHTIVKLHSVVGNRWSLIAAQLPGRTDNDVKNHWNTKLKRKLSGMG
                ***********:***: ***:***:***********.*********:******:******

AT5G56110.1     IDPVTHKPFSHLMAEITTTLNPPQVSHLAEAALGCFKDEMLHLLTKKRVDL-------NQ
pt031289_POPTR_ IDPVTHKPFSHLMAEIATTLATPQVTHLAEAALGCFKDEMLQLLTKKRIDFQLQHCNTNV
pt025667_POPTR_ IDPVTHKPFSHLMAEIATTLATPQVANLAEAALGCFKDEMLHLLTKKRIDFQLLQCNTNG
                ****************:*** .***::**************:******:*:       * 

AT5G56110.1     INFSNHNPNPNNFHEIADNEAGKIKMDGLDHG---NGIM---KLWDMGNGFSYGSSS---
pt031289_POPTR_ AQGNTSSPCISTKHDENDDTIEKIKL-GLSRAMQEPGMLPPNKIWD-----STGVTSPNL
pt025667_POPTR_ VQGNTSSPYTATKHDENDDTIERIKL-GFSRAMQEPGILPPNKTWD-----STGATSANF
                 : .. .*   . *:  *:   :**: *:.:.    *::   * **     * * :*   

AT5G56110.1     ------------------SSFGNEERNDGSASPAVAAWRGHGGIRTAVAETAAAEEEERR
pt031289_POPTR_ AGTCCDFPSSVNAFLCCPSSFGNE--------GALSLWNQ----SMCTGSTCTTGDQQGR
pt025667_POPTR_ AGTCAYFPSSVNAFLCGPSSFGNE--------VALSPWSQ----SMCTGSTCTAGDQQGR
                                  ******         *:: *        ....*.:: ::: *

AT5G56110.1     KLKGEVVDQEEIGSEGGRGDGMTMMRNHHHHQHVFNVDNVLWDLQADDLINHMV
pt031289_POPTR_ --LHEMLDNE----NGEEFEGGKEIRK---VSSIFNTDCVLWDMPSDDLMNPII
pt025667_POPTR_ --LHEKLDDE----NGEESQGGKEIRN---GSSLFNTDCVLWDLPSDDLMNSIV
                    * :*:*    :* . :* . :*:    . :**.* ****: :***:* ::
BoxShade v3.31 C (beta, 970507) Output
AT5G56110.1     M G R I P C C E K E N V K R G Q W T P E E D N K L A S Y I A Q H G T R N W R L I P K N A G L Q R C G K S C R L R W T N Y
pt031289_POPTR_    M G R I P C C E K D N V K R G Q W T P E E D N K L S S Y I A Q H G T R N W R L I P K N A G L Q R C G K S C R L R W T N Y
pt025667_POPTR_    M G R I P C C E K D N V K R G Q W T P E E D N K L S S Y I A Q H G T R N W R L I P K N A G L Q R C G K S C R L R W T N Y
 
AT5G56110.1     L R P D L K H G Q F S E A E E H I I V K F H S V L G N R W S L I A A Q L P G R T D N D V K N Y W N T K L K K K L S G M G
pt031289_POPTR_    L R P D L K H G Q F S D A E E Q T I V K L H S V V G N R W S L I A A Q L T G R T D N D V K N H W N T K L K K K L S G M G
pt025667_POPTR_    L R P D L K H G Q F S D A E E H T I V K L H S V V G N R W S L I A A Q L P G R T D N D V K N H W N T K L K R K L S G M G
 
AT5G56110.1     I D P V T H K P F S H L M A E I T T T L N P P Q V S H L A E A A L G C F K D E M L H L L T K K R V D L - - - - - - - N Q
pt031289_POPTR_    I D P V T H K P F S H L M A E I A T T L A T P Q V T H L A E A A L G C F K D E M L Q L L T K K R I D F Q L Q H C N T N V
pt025667_POPTR_    I D P V T H K P F S H L M A E I A T T L A T P Q V A N L A E A A L G C F K D E M L H L L T K K R I D F Q L L Q C N T N G
 
AT5G56110.1     I N F S N H N P N P N N F H E I A D N E A G K I K M D G L D H G - - - N G I M - - - K L W D M G N G F S Y G S S S - - -
pt031289_POPTR_    A Q G N T S S P C I S T K H D E N D D T I E K I K L - G L S R A M Q E P G M L P P N K I W D - - - - - S T G V T S P N L
pt025667_POPTR_    V Q G N T S S P Y T A T K H D E N D D T I E R I K L - G F S R A M Q E P G I L P P N K T W D - - - - - S T G A T S A N F
 
AT5G56110.1     - - - - - - - - - - - - - - - - - - S S F G N E E R N D G S A S P A V A A W R G H G G I R T A V A E T A A A E E E E R R
pt031289_POPTR_    A G T C C D F P S S V N A F L C C P S S F G N E - - - - - - - - G A L S L W N Q - - - - S M C T G S T C T T G D Q Q G R
pt025667_POPTR_    A G T C A Y F P S S V N A F L C G P S S F G N E - - - - - - - - V A L S P W S Q - - - - S M C T G S T C T A G D Q Q G R
 
AT5G56110.1     K L K G E V V D Q E E I G S E G G R G D G M T M M R N H H H H Q H V F N V D N V L W D L Q A D D L I N H M V
pt031289_POPTR_    - - L H E M L D N E - - - - N G E E F E G G K E I R K - - - V S S I F N T D C V L W D M P S D D L M N P I I
pt025667_POPTR_    - - L H E K L D D E - - - - N G E E S Q G G K E I R N - - - G S S L F N T D C V L W D L P S D D L M N S I V
 
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