fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56110.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023261 not found in 311aa AT5G56110.1 not_1st 0.575129533 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G56110.1     MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
gm023261_Glyma0 MGRIPCCEKDNVKRGQWTPEEDNKLSSYIVQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
                *********:***************:***.******************************

AT5G56110.1     LRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNTKLKKKLSGMG
gm023261_Glyma0 LRPDLKHGQFSDSEEQTIVKLHSVFGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMG
                ***********::**: ***:***:*********************:*************

AT5G56110.1     IDPVTHKPFSHLMAEITTTLNPPQVSHLAEAALGCFKDEMLHLLTKKRVDLNQ-------
gm023261_Glyma0 IDPVTHKPFSHLMAEIATTLAPPQAAHLAEAALGCFKDEVLHLLTKKPINFHQGQHSTAA
                ****************:*** ***.:*************:******* ::::*       

AT5G56110.1     --INFSNH-NPNPNNFHEIADNEAGKIKMD---GLDHGNGIM---KLWDMGNGFSYGSSS
gm023261_Glyma0 LGNNFTDYVNCKPDE----KDATVEKIKFDLSKAIQHDPEIMPANKPWD-SNATTSANFA
                   **::: * :*::     *  . ***:*   .::*.  **   * ** .*. : .. :

AT5G56110.1     SSFGNEERNDGSASPAVAAWRGH----------GGIRTAVAETAAAEEEERRKLKGEVVD
gm023261_Glyma0 MPYGVFPTMSGFQLSPVSFSKGHASQWSQSVCTGSTCTAMDQQIQLHE----KLEAEIGD
                 .:*     .*   ..*:  :**          *.  **: :    .*    **:.*: *

AT5G56110.1     QEEIGSEGGRGDGMTMMRNHHHHQHVFNVDNVLWDLQADDLINHMV
gm023261_Glyma0 DSEATKE---------IRN---LSNIFSSDCV--------------
                :.*  .*         :**    .::*. * *
BoxShade v3.31 C (beta, 970507) Output
AT5G56110.1     M G R I P C C E K E N V K R G Q W T P E E D N K L A S Y I A Q H G T R N W R L I P K N A G L Q R C G K S C R L R W T N Y
gm023261_Glyma0    M G R I P C C E K D N V K R G Q W T P E E D N K L S S Y I V Q H G T R N W R L I P K N A G L Q R C G K S C R L R W T N Y
 
AT5G56110.1     L R P D L K H G Q F S E A E E H I I V K F H S V L G N R W S L I A A Q L P G R T D N D V K N Y W N T K L K K K L S G M G
gm023261_Glyma0    L R P D L K H G Q F S D S E E Q T I V K L H S V F G N R W S L I A A Q L P G R T D N D V K N H W N T K L K K K L S G M G
 
AT5G56110.1     I D P V T H K P F S H L M A E I T T T L N P P Q V S H L A E A A L G C F K D E M L H L L T K K R V D L N Q - - - - - - -
gm023261_Glyma0    I D P V T H K P F S H L M A E I A T T L A P P Q A A H L A E A A L G C F K D E V L H L L T K K P I N F H Q G Q H S T A A
 
AT5G56110.1     - - I N F S N H - N P N P N N F H E I A D N E A G K I K M D - - - G L D H G N G I M - - - K L W D M G N G F S Y G S S S
gm023261_Glyma0    L G N N F T D Y V N C K P D E - - - - K D A T V E K I K F D L S K A I Q H D P E I M P A N K P W D - S N A T T S A N F A
 
AT5G56110.1     S S F G N E E R N D G S A S P A V A A W R G H - - - - - - - - - - G G I R T A V A E T A A A E E E E R R K L K G E V V D
gm023261_Glyma0    M P Y G V F P T M S G F Q L S P V S F S K G H A S Q W S Q S V C T G S T C T A M D Q Q I Q L H E - - - - K L E A E I G D
 
AT5G56110.1     Q E E I G S E G G R G D G M T M M R N H H H H Q H V F N V D N V L W D L Q A D D L I N H M V
gm023261_Glyma0    D S E A T K E - - - - - - - - - I R N - - - L S N I F S S D C V - - - - - - - - - - - - - -
 
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