fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb003892 not found in 480aa AT4G29230.1 not_not 0.400523560 III
Gm018245 not found in 447aa AT4G29230.1 not_not 0.475130890 III
Gm018246 not found in 409aa AT4G29230.1 not_not 0.475130890 III
Gm020071 not found in 452aa AT4G29230.1 not_not 0.468586387 III
Gm013312 not found in 375aa AT4G29230.1 not_not 0.463350785 III
Pt009615 not found in 452aa AT4G29230.1 not_not 0.476439790 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G56620.1     -MKN-------SKCN-----LIDSKLEEHH--HLCGSKHCPGCGRMIQAATKPNWVGLPA
pt009615_POPTR_ -MSTRCSMASISSSD-----LIDAKLEE-H--QLCGSKQCPGCGHKLEG--KPDWLGLPA
gm020071_Glyma0 -MNKIGNLSCVRSSD-----LIDAKLEE-H--QLCGSKQCPGCGHKFEG--KPDWLGLPA
gm018245_Glyma0 MMSKISNLSSVSSSD-----LIDAKLEE-H--QLCGSKQCPGCGHKFEG--KPDWLGLPA
gm013312_Glyma0 -MNKISNLSCVRSSD-----LIDAKLEE-H--QLCGSKQCPGCGHKFEG--KPDWLGLPA
Sb003892_Sorbi1 -MDGAAAAAAATGSGGGGHRRMDSRIEE-HGKYLSESSCCSQCGHKTER--KLDWVGLPA
gm018246_Glyma0 MMSKISNLSSVSSSD-----LIDAKLEE-H--QLCGSKQCPGCGHKFEG--KPDWLGLPA
                 *.          ..      :*:::** *   *. *. *. **:  :   * :*:****

AT5G56620.1     GVKFDPTDQELIEHLEAKVKGKEENKKWSSSHPLIDEFIPTIDGEDGICYTHPQKLPGVT
pt009615_POPTR_ GVKFDPTDQELIEHLEAKVEAKD-----MRSHPLIDEFIPTIEGEDGICYTHPEKLPGVT
gm020071_Glyma0 GVKFDPTDQELIEHLEAKVEAKN-----MKSHPLIDEFIPTIEGEDGICYTHPEKLPGVT
gm018245_Glyma0 GVKFDPTDQELTEHLEAKVEAKN-----MKSHPLIDEFIPTIEGEDGICYTHPEKLPGVT
gm013312_Glyma0 GVKFDPTDQELIEHLEAKIEAKN-----MKSHPLIDEFIPTIEGEDGICYTHPEKLPGVT
Sb003892_Sorbi1 GVKFDPTDQELIEHLQAKVRAASAA---APSHPLIDEFIPTIEGEDGICYTHPERLPGLT
gm018246_Glyma0 GVKFDPTDQELTEHLEAKVEAKN-----MKSHPLIDEFIPTIEGEDGICYTHPEKLPGVT
                *********** ***:**:.. .       ************:**********::***:*

AT5G56620.1     RDGLSKHFFHKPSRAYTTGTRKRRKIIQTDHDS------------ELTGSSETRWHKTGK
pt009615_POPTR_ RDGLSRHFFHRPSKAYTTGTRKRRK-IQTECD--------------LQG-GETRWHKTGK
gm020071_Glyma0 RDGLSRHFFHRPSKAYTTGTRKRRK-IQNECD--------------LQG-GETRWHKTGK
gm018245_Glyma0 RDGLSKHFFHRPSKAYTTGTRKRRK-IQNECD--------------LQG-GETRWHKTGK
gm013312_Glyma0 RDGLSRHFFHRPSKAYTTGTRKRRK-IQNECD--------------LQG-GETRWHKTGK
Sb003892_Sorbi1 KDGRSRHFFHRPSKAYTTGTRKRRK-IQPRAAESSSSSALPAQQQQQQQRSETRWHKTGK
gm018246_Glyma0 RDGLSKHFFHRPSKAYTTGTRKRRK-IQNECD--------------LQG-GETRWHKTGK
                :** *:****:**:*********** **                      .*********

AT5G56620.1     TRPVMINGQQRGCKKILVLYTNFGKNRRPEKTNWVMHQYHLGINEEEREGELVVSKIFYQ
pt009615_POPTR_ TRPVMVNGKQKGCKKILVLYTNFGKNRRPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQ
gm020071_Glyma0 TRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQYEEEREGELVVSKIFYQ
gm018245_Glyma0 TRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQ
gm013312_Glyma0 TRPVMVNGKQKGYKKILVLYTNFGKNRKPEKTNWVMHQYHMGQHEEEKEGELVVSKIFYQ
Sb003892_Sorbi1 TRPVVVAGQQRGCKKILVLYTNFGKHRKPDKTNWVMHQYHLGDKEEEREGELVVSKIFYQ
gm018246_Glyma0 TRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQ
                ****:: *:*:* ************:*:*:**********:*  ***:************

AT5G56620.1     TQPRQCVSNTNWSDHH-------------------------------GSKDVIGIGVGDE
pt009615_POPTR_ TQPRQC----NYTDRAASIGEG-SSEP--------NSRRDGGSGSC-SSKEI--SLHGDE
gm020071_Glyma0 TQPRQC----NWSDRSATTGEG-SGEQQSNNNNNNNGRRDSGSGTCSSSKEI-NVTHRDE
gm018245_Glyma0 TQPRQC----NWSDRSATTGEG-SGEP----NNNSTGRRDSGSGSC-SSKEI--VTHRDE
gm013312_Glyma0 TQPRQC----NWSDRSATTGEG-SGEQQP---NNNNGRRDSGSGSCSSSKEI--VTHRDE
Sb003892_Sorbi1 TQPRQC---------------GVAAEP--------------AVAAAASSDTV------EE
gm018246_Glyma0 TQPRQC----NWSDRSATTGEG-SGEP----NNNSTGRRDSGSGSC-SSKEI--VTHRDE
                ******                                         .*. :      :*

AT5G56620.1     ISSVA---------------ATLQSLGSGDVVSRVNMH----PHTRSFDE-GTAEASKGR
pt009615_POPTR_ ISGTGTVA------------SSLTSYTAMDIQQLKSDHFCFTPFRKGFDEVGIGEASVTR
gm020071_Glyma0 MSAVVVVPP----------ITTFNT--ALDIQQLKSDHFGFIPFRKGFDEVGIGEACTAR
gm018245_Glyma0 MSAVVGVPP----------MTGFTTHLPLDIQQLKPDHFSFIPFRKTFDEVGIGEASTAR
gm013312_Glyma0 MSAVVGVPP----------ITTFNT--SLDIQQLKSNHFGFIPFRKGFDEVGIGEASTAR
Sb003892_Sorbi1 AAADPPLPPDGMVVPPPDVAGAFHGAAGID-------EFNFAQFRSSFEEVDVGASS---
gm018246_Glyma0 MSAVVGVPP----------MTGFTTHLPLDIQQLKPDHFSFIPFRKTFDEVGIGEASTAR
                 :.                   :      *       .     .   *:* . . :.   

AT5G56620.1     ENQHVS-GTCEEVHDGIITSSMSSHHMIHDHHNQ---------------HHQIGDRREFH
pt009615_POPTR_ E-ASAS-ATCDEIREHHQM----PHHVAHDPHQQQTQQQQHHYHHHQTAHHQFAT-TAFH
gm020071_Glyma0 E-VQAS-GSCDEVHER---------HAVH--HHQ--QQQQQNQH----AQQQIAT-TASH
gm018245_Glyma0 EVVQAS-GSCEEVHERQR-----AQHVAH--H-----QQQQHAH-----HHQISN-SAFH
gm013312_Glyma0 E-VQAS-GSCNEVHER---------HVAH--HH---QQQQQNQH----AHQQIAT-TAFH
Sb003892_Sorbi1 --VQISVRDDEEVHAGHP-----NLHQEHNLHQHQFGNQEQR-------QRMAAAAAAFH
gm018246_Glyma0 EVVQAS-GSCEEVHERQR-----AQHVAH--H-----QQQQHAH-----HHQISN-SAFH
                     *    :*::           *  *  *                 ::  .     *

AT5G56620.1     MSS-SYPMTPTITS----QHESI-------F-HVTSTM----PFQGSVVWFGIRRPNYGL
pt009615_POPTR_ MSTPSHPFSTIISPPS-LNH-SIILDE-DPY-HVSRIMLQNEIQQQ------------QQ
gm020071_Glyma0 ISRPSLPISTIISPPP-LHHASIILDD-NSY-HVSRIMLQNENFQQQ----------HQQ
gm018245_Glyma0 ISRPSHPISTIISPPP-LHHTSIILDDNNSY-HVSRIMLQNENFQQ-------------Q
gm013312_Glyma0 ISSPSLPISTIISPPP-FHHASIILDD-NSY-H---------------------------
Sb003892_Sorbi1 INTPTEPITTMITSSTVVHHGSAVLQHPDAYGHGTTYRRHQQDDEQL----------HQQ
gm018246_Glyma0 ISRPSHPISTIISPPP-LHHTSIILDDNNSY-HVSRIMLQNENFQ---------------
                :.  : *::. *:.    :* *        : *                           

AT5G56620.1     YHSYVYRRRKFLTNL---CI----------------------------------------
pt009615_POPTR_ HHKMGGRSASGLEELIMGCTSND-----------------------VKEDSSIANPQEAE
gm020071_Glyma0 HYKLGGRSASGLEELIMGCTSTD-----------------------IKAESSIANPQ-AE
gm018245_Glyma0 HHKLGGRSASGLEELIMGCTSTE-----------------------IKEESSITNPQEAE
gm013312_Glyma0 ------------------------------------------------------------
Sb003892_Sorbi1 PQSFDGRSTAGLEAVIMGCTSSRRSKRGKKLNLPYNIYSYFYVFFCIQEASGSGGNKEST
gm018246_Glyma0 ------------------VITTQ-----------------------IP------------
                                                                            

AT5G56620.1     -------------------
pt009615_POPTR_ WLKYSSFWQDPGNQDHHG-
gm020071_Glyma0 WLKYSSYWPDPANMQDHRE
gm018245_Glyma0 WLKY-SYWPDPDNPDHHG-
gm013312_Glyma0 -------------------
Sb003892_Sorbi1 GWPYQSFWPS-DSQDHHG-
gm018246_Glyma0 LLKH-GYIYDYN-------
BoxShade v3.31 C (beta, 970507) Output
AT5G56620.1     - M K N - - - - - - - S K C N - - - - - L I D S K L E E H H - - H L C G S K H C P G C G R M I Q A A T K P N W V G L P A
pt009615_POPTR_    - M S T R C S M A S I S S S D - - - - - L I D A K L E E - H - - Q L C G S K Q C P G C G H K L E G - - K P D W L G L P A
gm020071_Glyma0    - M N K I G N L S C V R S S D - - - - - L I D A K L E E - H - - Q L C G S K Q C P G C G H K F E G - - K P D W L G L P A
gm018245_Glyma0    M M S K I S N L S S V S S S D - - - - - L I D A K L E E - H - - Q L C G S K Q C P G C G H K F E G - - K P D W L G L P A
gm013312_Glyma0    - M N K I S N L S C V R S S D - - - - - L I D A K L E E - H - - Q L C G S K Q C P G C G H K F E G - - K P D W L G L P A
Sb003892_Sorbi1    - M D G A A A A A A A T G S G G G G H R R M D S R I E E - H G K Y L S E S S C C S Q C G H K T E R - - K L D W V G L P A
gm018246_Glyma0    M M S K I S N L S S V S S S D - - - - - L I D A K L E E - H - - Q L C G S K Q C P G C G H K F E G - - K P D W L G L P A
 
AT5G56620.1     G V K F D P T D Q E L I E H L E A K V K G K E E N K K W S S S H P L I D E F I P T I D G E D G I C Y T H P Q K L P G V T
pt009615_POPTR_    G V K F D P T D Q E L I E H L E A K V E A K D - - - - - M R S H P L I D E F I P T I E G E D G I C Y T H P E K L P G V T
gm020071_Glyma0    G V K F D P T D Q E L I E H L E A K V E A K N - - - - - M K S H P L I D E F I P T I E G E D G I C Y T H P E K L P G V T
gm018245_Glyma0    G V K F D P T D Q E L T E H L E A K V E A K N - - - - - M K S H P L I D E F I P T I E G E D G I C Y T H P E K L P G V T
gm013312_Glyma0    G V K F D P T D Q E L I E H L E A K I E A K N - - - - - M K S H P L I D E F I P T I E G E D G I C Y T H P E K L P G V T
Sb003892_Sorbi1    G V K F D P T D Q E L I E H L Q A K V R A A S A A - - - A P S H P L I D E F I P T I E G E D G I C Y T H P E R L P G L T
gm018246_Glyma0    G V K F D P T D Q E L T E H L E A K V E A K N - - - - - M K S H P L I D E F I P T I E G E D G I C Y T H P E K L P G V T
 
AT5G56620.1     R D G L S K H F F H K P S R A Y T T G T R K R R K I I Q T D H D S - - - - - - - - - - - - E L T G S S E T R W H K T G K
pt009615_POPTR_    R D G L S R H F F H R P S K A Y T T G T R K R R K - I Q T E C D - - - - - - - - - - - - - - L Q G - G E T R W H K T G K
gm020071_Glyma0    R D G L S R H F F H R P S K A Y T T G T R K R R K - I Q N E C D - - - - - - - - - - - - - - L Q G - G E T R W H K T G K
gm018245_Glyma0    R D G L S K H F F H R P S K A Y T T G T R K R R K - I Q N E C D - - - - - - - - - - - - - - L Q G - G E T R W H K T G K
gm013312_Glyma0    R D G L S R H F F H R P S K A Y T T G T R K R R K - I Q N E C D - - - - - - - - - - - - - - L Q G - G E T R W H K T G K
Sb003892_Sorbi1    K D G R S R H F F H R P S K A Y T T G T R K R R K - I Q P R A A E S S S S S A L P A Q Q Q Q Q Q Q R S E T R W H K T G K
gm018246_Glyma0    R D G L S K H F F H R P S K A Y T T G T R K R R K - I Q N E C D - - - - - - - - - - - - - - L Q G - G E T R W H K T G K
 
AT5G56620.1     T R P V M I N G Q Q R G C K K I L V L Y T N F G K N R R P E K T N W V M H Q Y H L G I N E E E R E G E L V V S K I F Y Q
pt009615_POPTR_    T R P V M V N G K Q K G C K K I L V L Y T N F G K N R R P E K T N W V M H Q Y H L G Q H E E E K E G E L V V S K I F Y Q
gm020071_Glyma0    T R P V M V N G K Q K G C K K I L V L Y T N F G K N R K P E K T N W V M H Q Y H L G Q Y E E E R E G E L V V S K I F Y Q
gm018245_Glyma0    T R P V M V N G K Q K G C K K I L V L Y T N F G K N R K P E K T N W V M H Q Y H L G Q H E E E K E G E L V V S K I F Y Q
gm013312_Glyma0    T R P V M V N G K Q K G Y K K I L V L Y T N F G K N R K P E K T N W V M H Q Y H M G Q H E E E K E G E L V V S K I F Y Q
Sb003892_Sorbi1    T R P V V V A G Q Q R G C K K I L V L Y T N F G K H R K P D K T N W V M H Q Y H L G D K E E E R E G E L V V S K I F Y Q
gm018246_Glyma0    T R P V M V N G K Q K G C K K I L V L Y T N F G K N R K P E K T N W V M H Q Y H L G Q H E E E K E G E L V V S K I F Y Q
 
AT5G56620.1     T Q P R Q C V S N T N W S D H H - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G S K D V I G I G V G D E
pt009615_POPTR_    T Q P R Q C - - - - N Y T D R A A S I G E G - S S E P - - - - - - - - N S R R D G G S G S C - S S K E I - - S L H G D E
gm020071_Glyma0    T Q P R Q C - - - - N W S D R S A T T G E G - S G E Q Q S N N N N N N N G R R D S G S G T C S S S K E I - N V T H R D E
gm018245_Glyma0    T Q P R Q C - - - - N W S D R S A T T G E G - S G E P - - - - N N N S T G R R D S G S G S C - S S K E I - - V T H R D E
gm013312_Glyma0    T Q P R Q C - - - - N W S D R S A T T G E G - S G E Q Q P - - - N N N N G R R D S G S G S C S S S K E I - - V T H R D E
Sb003892_Sorbi1    T Q P R Q C - - - - - - - - - - - - - - - G V A A E P - - - - - - - - - - - - - - A V A A A A S S D T V - - - - - - E E
gm018246_Glyma0    T Q P R Q C - - - - N W S D R S A T T G E G - S G E P - - - - N N N S T G R R D S G S G S C - S S K E I - - V T H R D E
 
AT5G56620.1     I S S V A - - - - - - - - - - - - - - - A T L Q S L G S G D V V S R V N M H - - - - P H T R S F D E - G T A E A S K G R
pt009615_POPTR_    I S G T G T V A - - - - - - - - - - - - S S L T S Y T A M D I Q Q L K S D H F C F T P F R K G F D E V G I G E A S V T R
gm020071_Glyma0    M S A V V V V P P - - - - - - - - - - I T T F N T - - A L D I Q Q L K S D H F G F I P F R K G F D E V G I G E A C T A R
gm018245_Glyma0    M S A V V G V P P - - - - - - - - - - M T G F T T H L P L D I Q Q L K P D H F S F I P F R K T F D E V G I G E A S T A R
gm013312_Glyma0    M S A V V G V P P - - - - - - - - - - I T T F N T - - S L D I Q Q L K S N H F G F I P F R K G F D E V G I G E A S T A R
Sb003892_Sorbi1    A A A D P P L P P D G M V V P P P D V A G A F H G A A G I D - - - - - - - E F N F A Q F R S S F E E V D V G A S S - - -
gm018246_Glyma0    M S A V V G V P P - - - - - - - - - - M T G F T T H L P L D I Q Q L K P D H F S F I P F R K T F D E V G I G E A S T A R
 
AT5G56620.1     E N Q H V S - G T C E E V H D G I I T S S M S S H H M I H D H H N Q - - - - - - - - - - - - - - - H H Q I G D R R E F H
pt009615_POPTR_    E - A S A S - A T C D E I R E H H Q M - - - - P H H V A H D P H Q Q Q T Q Q Q Q H H Y H H H Q T A H H Q F A T - T A F H
gm020071_Glyma0    E - V Q A S - G S C D E V H E R - - - - - - - - - H A V H - - H H Q - - Q Q Q Q Q N Q H - - - - A Q Q Q I A T - T A S H
gm018245_Glyma0    E V V Q A S - G S C E E V H E R Q R - - - - - A Q H V A H - - H - - - - - Q Q Q Q H A H - - - - - H H Q I S N - S A F H
gm013312_Glyma0    E - V Q A S - G S C N E V H E R - - - - - - - - - H V A H - - H H - - - Q Q Q Q Q N Q H - - - - A H Q Q I A T - T A F H
Sb003892_Sorbi1    - - V Q I S V R D D E E V H A G H P - - - - - N L H Q E H N L H Q H Q F G N Q E Q R - - - - - - - Q R M A A A A A A F H
gm018246_Glyma0    E V V Q A S - G S C E E V H E R Q R - - - - - A Q H V A H - - H - - - - - Q Q Q Q H A H - - - - - H H Q I S N - S A F H
 
AT5G56620.1     M S S - S Y P M T P T I T S - - - - Q H E S I - - - - - - - F - H V T S T M - - - - P F Q G S V V W F G I R R P N Y G L
pt009615_POPTR_    M S T P S H P F S T I I S P P S - L N H - S I I L D E - D P Y - H V S R I M L Q N E I Q Q Q - - - - - - - - - - - - Q Q
gm020071_Glyma0    I S R P S L P I S T I I S P P P - L H H A S I I L D D - N S Y - H V S R I M L Q N E N F Q Q Q - - - - - - - - - - H Q Q
gm018245_Glyma0    I S R P S H P I S T I I S P P P - L H H T S I I L D D N N S Y - H V S R I M L Q N E N F Q Q - - - - - - - - - - - - - Q
gm013312_Glyma0    I S S P S L P I S T I I S P P P - F H H A S I I L D D - N S Y - H - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb003892_Sorbi1    I N T P T E P I T T M I T S S T V V H H G S A V L Q H P D A Y G H G T T Y R R H Q Q D D E Q L - - - - - - - - - - H Q Q
gm018246_Glyma0    I S R P S H P I S T I I S P P P - L H H T S I I L D D N N S Y - H V S R I M L Q N E N F Q - - - - - - - - - - - - - - -
 
AT5G56620.1     Y H S Y V Y R R R K F L T N L - - - C I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt009615_POPTR_    H H K M G G R S A S G L E E L I M G C T S N D - - - - - - - - - - - - - - - - - - - - - - - V K E D S S I A N P Q E A E
gm020071_Glyma0    H Y K L G G R S A S G L E E L I M G C T S T D - - - - - - - - - - - - - - - - - - - - - - - I K A E S S I A N P Q - A E
gm018245_Glyma0    H H K L G G R S A S G L E E L I M G C T S T E - - - - - - - - - - - - - - - - - - - - - - - I K E E S S I T N P Q E A E
gm013312_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb003892_Sorbi1    P Q S F D G R S T A G L E A V I M G C T S S R R S K R G K K L N L P Y N I Y S Y F Y V F F C I Q E A S G S G G N K E S T
gm018246_Glyma0    - - - - - - - - - - - - - - - - - - V I T T Q - - - - - - - - - - - - - - - - - - - - - - - I P - - - - - - - - - - - -
 
AT5G56620.1     - - - - - - - - - - - - - - - - - - -
pt009615_POPTR_    W L K Y S S F W Q D P G N Q D H H G -
gm020071_Glyma0    W L K Y S S Y W P D P A N M Q D H R E
gm018245_Glyma0    W L K Y - S Y W P D P D N P D H H G -
gm013312_Glyma0    - - - - - - - - - - - - - - - - - - -
Sb003892_Sorbi1    G W P Y Q S F W P S - D S Q D H H G -
gm018246_Glyma0    L L K H - G Y I Y D Y N - - - - - - -
 
0