fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G56620.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt009615 not found in 452aa AT4G29230.1 not_not 0.476439790 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G56620.1     MKNSKC--------NLIDSKLEEHHHLCGSKHCPGCGRMIQAATKPNWVGLPAGVKFDPT
pt009615_POPTR_ -MSTRCSMASISSSDLIDAKLEE-HQLCGSKQCPGCGHKLEG--KPDWLGLPAGVKFDPT
                  .::*        :***:**** *:*****:*****: ::.  **:*:***********

AT5G56620.1     DQELIEHLEAKVKGKEENKKWSSSHPLIDEFIPTIDGEDGICYTHPQKLPGVTRDGLSKH
pt009615_POPTR_ DQELIEHLEAKVEAKD-----MRSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRH
                ************:.*:       ************:**********:***********:*

AT5G56620.1     FFHKPSRAYTTGTRKRRKIIQTDHDSELTGSSETRWHKTGKTRPVMINGQQRGCKKILVL
pt009615_POPTR_ FFHRPSKAYTTGTRKRRK-IQTECD--LQG-GETRWHKTGKTRPVMVNGKQKGCKKILVL
                ***:**:*********** ***: *  * * .**************:**:*:********

AT5G56620.1     YTNFGKNRRPEKTNWVMHQYHLGINEEEREGELVVSKIFYQTQPRQCVSNTNWSDHHGSK
pt009615_POPTR_ YTNFGKNRRPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQC----NYTDRAAS-
                *********************** :***:******************    *::*: .* 

AT5G56620.1     DVIGIGV----------------------GDEIS---SVAATLQSLGSGDVVSRVNMH--
pt009615_POPTR_ --IGEGSSEPNSRRDGGSGSCSSKEISLHGDEISGTGTVASSLTSYTAMDIQQLKSDHFC
                  ** *                       *****   :**::* *  : *: .  . *  

AT5G56620.1     --PHTRSFDE-GTAEASKGRENQHVSGTCEEVHDGIITSSMSSHHMIHD----------H
pt009615_POPTR_ FTPFRKGFDEVGIGEASVTREAS-ASATCDEIRE----HHQMPHHVAHDPHQQQTQQQQH
                  *. :.*** * .***  ** . .*.**:*:::        .**: **          *

AT5G56620.1     HNQHHQIGDRR----EFHMSS-SYPMTPTIT--SQHESI------FHVTSTMPFQGSVVW
pt009615_POPTR_ HYHHHQTAHHQFATTAFHMSTPSHPFSTIISPPSLNHSIILDEDPYHVSRIM-LQNEI--
                * :*** ..::     ****: *:*::. *:  * :.**      :**:  * :*..:  

AT5G56620.1     FGIRRPNYGLYHSYVYRRRKFLTNLCI---------------------------------
pt009615_POPTR_ -----QQQQQHHKMGGRSASGLEELIMGCTSNDVKEDSSIANPQEAEWLKYSSFWQDPGN
                      :   :*.   *  . * :* :                                 

AT5G56620.1     -----
pt009615_POPTR_ QDHHG
BoxShade v3.31 C (beta, 970507) Output
AT5G56620.1     M K N S K C - - - - - - - - N L I D S K L E E H H H L C G S K H C P G C G R M I Q A A T K P N W V G L P A G V K F D P T
pt009615_POPTR_    - M S T R C S M A S I S S S D L I D A K L E E - H Q L C G S K Q C P G C G H K L E G - - K P D W L G L P A G V K F D P T
 
AT5G56620.1     D Q E L I E H L E A K V K G K E E N K K W S S S H P L I D E F I P T I D G E D G I C Y T H P Q K L P G V T R D G L S K H
pt009615_POPTR_    D Q E L I E H L E A K V E A K D - - - - - M R S H P L I D E F I P T I E G E D G I C Y T H P E K L P G V T R D G L S R H
 
AT5G56620.1     F F H K P S R A Y T T G T R K R R K I I Q T D H D S E L T G S S E T R W H K T G K T R P V M I N G Q Q R G C K K I L V L
pt009615_POPTR_    F F H R P S K A Y T T G T R K R R K - I Q T E C D - - L Q G - G E T R W H K T G K T R P V M V N G K Q K G C K K I L V L
 
AT5G56620.1     Y T N F G K N R R P E K T N W V M H Q Y H L G I N E E E R E G E L V V S K I F Y Q T Q P R Q C V S N T N W S D H H G S K
pt009615_POPTR_    Y T N F G K N R R P E K T N W V M H Q Y H L G Q H E E E K E G E L V V S K I F Y Q T Q P R Q C - - - - N Y T D R A A S -
 
AT5G56620.1     D V I G I G V - - - - - - - - - - - - - - - - - - - - - - G D E I S - - - S V A A T L Q S L G S G D V V S R V N M H - -
pt009615_POPTR_    - - I G E G S S E P N S R R D G G S G S C S S K E I S L H G D E I S G T G T V A S S L T S Y T A M D I Q Q L K S D H F C
 
AT5G56620.1     - - P H T R S F D E - G T A E A S K G R E N Q H V S G T C E E V H D G I I T S S M S S H H M I H D - - - - - - - - - - H
pt009615_POPTR_    F T P F R K G F D E V G I G E A S V T R E A S - A S A T C D E I R E - - - - H H Q M P H H V A H D P H Q Q Q T Q Q Q Q H
 
AT5G56620.1     H N Q H H Q I G D R R - - - - E F H M S S - S Y P M T P T I T - - S Q H E S I - - - - - - F H V T S T M P F Q G S V V W
pt009615_POPTR_    H Y H H H Q T A H H Q F A T T A F H M S T P S H P F S T I I S P P S L N H S I I L D E D P Y H V S R I M - L Q N E I - -
 
AT5G56620.1     F G I R R P N Y G L Y H S Y V Y R R R K F L T N L C I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt009615_POPTR_    - - - - - Q Q Q Q Q H H K M G G R S A S G L E E L I M G C T S N D V K E D S S I A N P Q E A E W L K Y S S F W Q D P G N
 
AT5G56620.1     - - - - -
pt009615_POPTR_    Q D H H G
 
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